Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)
Found 23 curated entries in PaperBLAST's database that match '1.13.12.2'.
These curated entries have 19 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query
| H281DRAFT_06468: Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase is similar to: | PaperBLAST |
novR / Q9L9F0: 3-dimethylallyl-4-hydroxyphenylpyruvate oxygenase (EC 1.13.12.23; EC 1.13.11.83) from Streptomyces niveus | 49% id, 93% cov |
CLOR_STRRC / Q8GHB1: 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase; Bifunctional non-heme iron oxygenase; Clorobiocin biosynthesis protein CloR; EC 1.13.11.83; EC 1.13.12.23 from Streptomyces roseochromogenus | 49% id, 90% cov |
| H281DRAFT_05965: Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase is similar to: | PaperBLAST |
novR / Q9L9F0: 3-dimethylallyl-4-hydroxyphenylpyruvate oxygenase (EC 1.13.12.23; EC 1.13.11.83) from Streptomyces niveus | 41% id, 92% cov |
CLOR_STRRC / Q8GHB1: 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase; Bifunctional non-heme iron oxygenase; Clorobiocin biosynthesis protein CloR; EC 1.13.11.83; EC 1.13.12.23 from Streptomyces roseochromogenus | 40% id, 90% cov |
| H281DRAFT_05329: Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase is similar to: | PaperBLAST |
novR / Q9L9F0: 3-dimethylallyl-4-hydroxyphenylpyruvate oxygenase (EC 1.13.12.23; EC 1.13.11.83) from Streptomyces niveus | 34% id, 75% cov |
CLOR_STRRC / Q8GHB1: 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase; Bifunctional non-heme iron oxygenase; Clorobiocin biosynthesis protein CloR; EC 1.13.11.83; EC 1.13.12.23 from Streptomyces roseochromogenus | 34% id, 73% cov |
| H281DRAFT_03454: Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase is similar to: | PaperBLAST |
novR / Q9L9F0: 3-dimethylallyl-4-hydroxyphenylpyruvate oxygenase (EC 1.13.12.23; EC 1.13.11.83) from Streptomyces niveus | 31% id, 80% cov |
CLOR_STRRC / Q8GHB1: 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase; Bifunctional non-heme iron oxygenase; Clorobiocin biosynthesis protein CloR; EC 1.13.11.83; EC 1.13.12.23 from Streptomyces roseochromogenus | 31% id, 78% cov |
| H281DRAFT_02874: Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase is similar to: | PaperBLAST |
novR / Q9L9F0: 3-dimethylallyl-4-hydroxyphenylpyruvate oxygenase (EC 1.13.12.23; EC 1.13.11.83) from Streptomyces niveus | 29% id, 73% cov |
CLOR_STRRC / Q8GHB1: 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase; Bifunctional non-heme iron oxygenase; Clorobiocin biosynthesis protein CloR; EC 1.13.11.83; EC 1.13.12.23 from Streptomyces roseochromogenus | 29% id, 71% cov |
| H281DRAFT_03609: squalene-associated FAD-dependent desaturase is similar to: | PaperBLAST |
PfGW456L13_1171: Lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens | 29% id, 19% cov |
AO356_14230: lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens | 34% id, 12% cov |
Q88QV1: lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas putida | 34% id, 12% cov |
| H281DRAFT_03219: gamma-glutamylputrescine oxidase is similar to: | PaperBLAST |
PfGW456L13_1171: Lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens | 39% id, 11% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 416579-417928 (frame -3) on H281DRAFT_scaffold00002.2 is similar to: | PaperBLAST |
W6JQJ6: lysine 2-monooxygenase (EC 1.13.12.2); L-amino-acid oxidase (EC 1.4.3.2) from Pseudomonas sp. | 34% id, 16% cov |
Q88QV1: lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas putida | 34% id, 16% cov |
AO356_14230: lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens | 34% id, 16% cov |
Lawrence Berkeley National Laboratory