Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 5 curated entries in PaperBLAST's database that match '1.2.1.91'.

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_05724: phenylacetic acid degradation protein paaN
is similar to:
PaperBLAST

H281DRAFT_05724: 3-oxo-5,6-didehydrosuberyl-CoA semialdehyde dehydrogenase PaaZ (EC:1.2.1.91) from Paraburkholderia bryophila

100% id,
100% cov

BPHYT_RS17340: 3-oxo-5,6-didehydrosuberyl-CoA semialdehyde dehydrogenase PaaZ (EC:1.2.1.91) from Burkholderia phytofirmans

93% id,
100% cov

H281DRAFT_00370: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase (EC 1.2.1.77)
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli

44% id,
75% cov

H281DRAFT_02499: Acyl-CoA reductase
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli

25% id,
70% cov

H281DRAFT_03178: succinate semialdehyde dehydrogenase
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli

24% id,
72% cov

H281DRAFT_03505: putative phosphonoacetaldehyde dehydrogenase
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli

24% id,
71% cov

H281DRAFT_01833: aldehyde dehydrogenase (NAD+)
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli

24% id,
70% cov

H281DRAFT_02404: L-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli

23% id,
72% cov

H281DRAFT_00307: Acyl-CoA reductase
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli

27% id,
56% cov

H281DRAFT_01117: aldehyde dehydrogenase (NAD+)
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli

26% id,
52% cov

H281DRAFT_02531: Acyl dehydratase
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli

35% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory