Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 8 curated entries in PaperBLAST's database that match '1.3.1.78'.

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_03923: prephenate dehydrogenase (EC 1.3.1.12)
is similar to:
PaperBLAST

tyrAa / P73906: arogenate dehydrogenase monomer (EC 1.3.1.78) from Synechocystis sp.
P73906: arogenate dehydrogenase (NADP+) (EC 1.3.1.78) from Synechocystis sp.

30% id,
100% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory