Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 13 curated entries in PaperBLAST's database that match '2.1.2.10' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_02411: aminomethyltransferase
is similar to:
PaperBLAST

GCST_ECOLI / P27248: Aminomethyltransferase; Glycine cleavage system T protein; EC 2.1.2.10 from Escherichia coli
GcvT / b2905: aminomethyltransferase (EC 2.1.2.10) from Escherichia coli
gcvT: aminomethyltransferase; EC 2.1.2.10 from Escherichia coli
gcvT / P27248: aminomethyltransferase (EC 2.1.2.10) from Escherichia coli

54% id,
99% cov

BWI76_RS23880: Aminomethyltransferase (EC 2.1.2.10) from Klebsiella michiganensis

52% id,
99% cov

PfGW456L13_1866: Aminomethyltransferase (EC 2.1.2.10) from Pseudomonas fluorescens

38% id,
97% cov

More...

H281DRAFT_06542: 4-methylaminobutanoate oxidase (formaldehyde-forming)
is similar to:
PaperBLAST

PfGW456L13_1866: Aminomethyltransferase (EC 2.1.2.10) from Pseudomonas fluorescens

28% id,
98% cov

Pf6N2E2_5556: Aminomethyltransferase (EC 2.1.2.10) from Pseudomonas fluorescens

28% id,
98% cov

PS417_22370: Aminomethyltransferase (EC 2.1.2.10) from Pseudomonas simiae

26% id,
98% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory