Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 12 curated entries in PaperBLAST's database that match '2.3.1.109'.

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_06480: arginine succinyltransferase
is similar to:
PaperBLAST

ASTA_ECOLI / P0AE37: Arginine N-succinyltransferase; AST; AOST; EC 2.3.1.109 from Escherichia coli
YdjV / b1747: arginine N-succinyltransferase (EC 2.3.1.109) from Escherichia coli
astA / P0AE37: arginine N-succinyltransferase (EC 2.3.1.109) from Escherichia coli

48% id,
98% cov

ASTA_SALTY / Q8ZPV1: Arginine N-succinyltransferase; AST; AOST; EC 2.3.1.109 from Salmonella typhimurium

47% id,
98% cov

Sama_3010: Arginine N-succinyltransferase (EC 2.3.1.109) from Shewanella amazonensis

45% id,
100% cov

More...

H281DRAFT_06479: arginine succinyltransferase
is similar to:
PaperBLAST

astA / GI|2654610: arginine N-succinyltransferase; EC 2.3.1.109 from Pseudomonas aeruginosa
aruF / P80357: arginine succinyltransferase α subunit (EC 2.3.1.109) from Pseudomonas aeruginosa

44% id,
100% cov

HP15_3041: Arginine N-succinyltransferase (EC 2.3.1.109) from Marinobacter adhaerens

42% id,
100% cov

ASTA_SALTY / Q8ZPV1: Arginine N-succinyltransferase; AST; AOST; EC 2.3.1.109 from Salmonella typhimurium

36% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory