Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 13 curated entries in PaperBLAST's database that match '2.3.1.168' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_00467: pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
is similar to:
PaperBLAST

Pf6N2E2_479: Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Pseudomonas fluorescens

36% id,
98% cov

PfGW456L13_3542: Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Pseudomonas fluorescens

36% id,
98% cov

SMc03203: Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Sinorhizobium meliloti

33% id,
96% cov

More...

H281DRAFT_05114: 2-oxoglutarate dehydrogenase E2 component
is similar to:
PaperBLAST

HP15_1631: Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Marinobacter adhaerens

32% id,
99% cov

Pf6N2E2_479: Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Pseudomonas fluorescens

32% id,
99% cov

PfGW456L13_3542: Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Pseudomonas fluorescens

32% id,
99% cov

More...

H281DRAFT_00468: dihydrolipoamide dehydrogenase
is similar to:
PaperBLAST

ODB2_ARATH / Q9M7Z1: Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial; Branched-chain alpha-keto acid dehydrogenase complex component E2; BCE2; BCKAD-E2; BCKADE2; Dihydrolipoamide acetyltransferase component of branched-chain alpha-keto acid dehydrogenase complex; Dihydrolipoamide branched chain transacylase; Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase; Protein DARK INDUCIBLE 3; EC 2.3.1.168 from Arabidopsis thaliana

27% id,
34% cov

SMc03203: Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Sinorhizobium meliloti

30% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory