Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 80 curated entries in PaperBLAST's database that match '2.5.1.47' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_03911: cysteine synthase
is similar to:
PaperBLAST

P29848: S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) (EC 2.5.1.144); cysteine synthase (EC 2.5.1.47) from Salmonella enterica

64% id,
96% cov

CYSM_ECOLI / P16703: Cysteine synthase B; CSase B; O-acetylserine (thiol)-lyase B; OAS-TL B; O-acetylserine sulfhydrylase B; EC 2.5.1.47 from Escherichia coli
CysM / b2421: cysteine synthase B (EC 2.5.1.47; EC 2.5.1.144; EC 4.4.1.1; EC 4.4.1.28) from Escherichia coli
cysM / P16703: cysteine synthase B (EC 2.5.1.47; EC 2.5.1.144; EC 4.4.1.1) from Escherichia coli

63% id,
96% cov

CYSK_SYNE7 / Q59966: Cysteine synthase; CSase; O-acetylserine (thiol)-lyase; OAS-TL; O-acetylserine sulfhydrylase; EC 2.5.1.47 from Synechococcus elongatus

47% id,
93% cov

More...

H281DRAFT_04486: O-acetylhomoserine sulfhydrylase
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

43% id,
99% cov

H281DRAFT_05256: threonine ammonia-lyase, biosynthetic, long form
is similar to:
PaperBLAST

CYSK_CITLA / Q43317: Cysteine synthase; CSase; Beta-PA/CSase; Beta-pyrazolylalanine synthase; L-mimosine synthase; O-acetylserine (thiol)-lyase; OAS-TL; O-acetylserine sulfhydrylase; EC 2.5.1.47; EC 2.5.1.51; EC 4.2.1.50; EC 2.5.1.52 from Citrullus lanatus

25% id,
97% cov

F5HTD7: cysteine synthase (EC 2.5.1.47) from Mimosa pudica

27% id,
81% cov

CYSK_BACSU / P37887: Cysteine synthase; CSase; O-acetylserine (thiol)-lyase; OAS-TL; Superoxide-inducible protein 11; SOI11; EC 2.5.1.47 from Bacillus subtilis
P37887: cysteine synthase (EC 2.5.1.47) from Bacillus subtilis

24% id,
90% cov

More...

H281DRAFT_00878: threonine dehydratase
is similar to:
PaperBLAST

cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori

24% id,
91% cov

A0A2H5HU77: cysteine synthase (EC 2.5.1.47) from Lathyrus sativus

22% id,
88% cov

A3RM06: cysteine synthase (EC 2.5.1.47) from Glycine max

24% id,
81% cov

More...

H281DRAFT_06059: O-succinylhomoserine sulfhydrylase
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

39% id,
51% cov

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

36% id,
40% cov

H281DRAFT_04606: threonine ammonia-lyase, biosynthetic, long form
is similar to:
PaperBLAST

cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori

31% id,
61% cov

CYSK_BACSU / P37887: Cysteine synthase; CSase; O-acetylserine (thiol)-lyase; OAS-TL; Superoxide-inducible protein 11; SOI11; EC 2.5.1.47 from Bacillus subtilis
P37887: cysteine synthase (EC 2.5.1.47) from Bacillus subtilis

26% id,
73% cov

CAS1_SOLTU / Q76MX2: Bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial; EC 2.5.1.47; EC 4.4.1.9 from Solanum tuberosum

26% id,
72% cov

More...

H281DRAFT_01568: D-serine ammonia-lyase
is similar to:
PaperBLAST

A0A0F6AQU1: cysteine synthase (EC 2.5.1.47) from Brucella abortus

25% id,
69% cov

H281DRAFT_00859: cystathionine beta-lyase
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

27% id,
48% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

6-1037 (frame -1) on H281DRAFT_scaffold00009.9
is similar to:
PaperBLAST

CAS1_SOLTU / Q76MX2: Bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial; EC 2.5.1.47; EC 4.4.1.9 from Solanum tuberosum
Also see hits to annotated proteins above

26% id,
76% cov

CAS2_SOLTU / Q9FS29: Bifunctional L-3-cyanoalanine synthase/cysteine synthase 2, mitochondrial; EC 2.5.1.47; EC 4.4.1.9 from Solanum tuberosum
Also see hits to annotated proteins above

24% id,
78% cov

CYSC_SPIOL / Q43153: Bifunctional L-3-cyanoalanine synthase/cysteine synthase, mitochondrial; Beta-cyanoalanine synthase; SoCAS; Beta-substituted Ala synthase 3-1; SPIol-Bsas3-1; Cysteine synthase C; EC 2.5.1.47; EC 4.4.1.9 from Spinacia oleracea
Also see hits to annotated proteins above

24% id,
74% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory