Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 114 curated entries in PaperBLAST's database that match '2.7.1.1' as complete word(s).

These curated entries have 79 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_00163: glucokinase /transcriptional regulator, RpiR family
is similar to:
PaperBLAST

Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli
glk / P0A6V8: glucokinase (EC 2.7.1.1; EC 2.7.1.8) from Escherichia coli

44% id,
98% cov

H281DRAFT_03223: Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain
is similar to:
PaperBLAST

Q5RLG0: hexokinase (EC 2.7.1.1) from Thermus caldophilus

26% id,
96% cov

Q5SLJ4: hexokinase (EC 2.7.1.1) from Thermus thermophilus

25% id,
96% cov

rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis

24% id,
95% cov

More...

H281DRAFT_05731: glucosamine kinase
is similar to:
PaperBLAST

Q96Y14: hexokinase (EC 2.7.1.1) from Sulfurisphaera tokodaii

29% id,
83% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory