Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 31 curated entries in PaperBLAST's database that match '2.7.1.15' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_01116: ribokinase
is similar to:
PaperBLAST

H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila

100% id,
100% cov

BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans

85% id,
97% cov

AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

45% id,
99% cov

More...

H281DRAFT_05229: ribokinase
is similar to:
PaperBLAST

AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

67% id,
98% cov

AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

66% id,
98% cov

Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

66% id,
98% cov

More...

H281DRAFT_00856: 2-keto-3-deoxygluconate kinase
is similar to:
PaperBLAST

A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae

32% id,
88% cov

RBSK_STAAC / A0A0H2WZY4: Ribokinase; RK; EC 2.7.1.15 from Staphylococcus aureus
A0A0H2WZY4: ribokinase (EC 2.7.1.15) from Staphylococcus aureus

29% id,
95% cov

BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron

28% id,
93% cov

More...

H281DRAFT_02118: fructokinase
is similar to:
PaperBLAST

SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti

27% id,
98% cov

H281DRAFT_05211: 2-dehydro-3-deoxygluconokinase
is similar to:
PaperBLAST

Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

29% id,
89% cov

H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila

29% id,
88% cov

SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti

26% id,
99% cov

More...

H281DRAFT_06279: adenosine kinase
is similar to:
PaperBLAST

H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila

25% id,
84% cov

BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans

24% id,
82% cov

H281DRAFT_00797: D-alpha,beta-D-heptose 7-phosphate 1-kinase (EC 2.7.1.167)
is similar to:
PaperBLAST

H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila

37% id,
41% cov

RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana
RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana
A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana

28% id,
37% cov

H281DRAFT_00714: ribose-5-phosphate isomerase
is similar to:
PaperBLAST

RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis

35% id,
43% cov

H281DRAFT_04459: 5-dehydro-2-deoxygluconokinase
is similar to:
PaperBLAST

H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila

30% id,
43% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory