Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 36 curated entries in PaperBLAST's database that match '2.7.1.30' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_04229: glycerol kinase
is similar to:
PaperBLAST

A6TFR2: glycerol kinase (EC 2.7.1.30) from Klebsiella pneumoniae

61% id,
99% cov

GLPK_ECOLI / P0A6F3: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Escherichia coli
GlpK / b3926: glycerol kinase (EC 2.7.1.30) from Escherichia coli
glpK: glycerol kinase; EC 2.7.1.30 from Escherichia coli
glpK / P0A6F3: glycerol kinase (EC 2.7.1.30) from Escherichia coli

60% id,
99% cov

PS417_05575: Glycerol kinase (EC 2.7.1.30) from Pseudomonas simiae

61% id,
97% cov

More...

H281DRAFT_04146: xylulokinase
is similar to:
PaperBLAST

B0I530: glycerol kinase (EC 2.7.1.30) from Trypanosoma vivax

28% id,
98% cov

Q75T26: glycerol kinase (EC 2.7.1.30) from Trypanosoma congolense

27% id,
97% cov

P74260: glycerol kinase (EC 2.7.1.30) from Synechocystis sp.

29% id,
91% cov

More...

H281DRAFT_04167: xylulokinase
is similar to:
PaperBLAST

P74260: glycerol kinase (EC 2.7.1.30) from Synechocystis sp.

25% id,
91% cov

GLPK_ENTFA / O34154: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus faecalis

25% id,
89% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory