Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 31 curated entries in PaperBLAST's database that match '2.7.2.1' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_00303: formate-dependent phosphoribosylglycinamide formyltransferase
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli

62% id,
99% cov

H281DRAFT_01409: acetate kinase
is similar to:
PaperBLAST

P75245: acetate kinase (EC 2.7.2.1) from Mycoplasma pneumoniae

39% id,
98% cov

A2RNG5: acetate kinase (EC 2.7.2.1) from Lactococcus lactis

39% id,
98% cov

G4T0C7: acetate kinase (EC 2.7.2.1) from Methylotuvimicrobium alcaliphilum

39% id,
97% cov

More...

H281DRAFT_02796: acetate kinase
is similar to:
PaperBLAST

P9WQH1: acetate kinase (EC 2.7.2.1) from Mycobacterium tuberculosis

38% id,
99% cov

G4T0C7: acetate kinase (EC 2.7.2.1) from Methylotuvimicrobium alcaliphilum

38% id,
100% cov

ACKA_METTE / P38502: Acetate kinase; Acetokinase; EC 2.7.2.1 from Methanosarcina thermophila
P38502: acetate kinase (EC 2.7.2.1) from Methanosarcina thermophila

38% id,
97% cov

More...

H281DRAFT_04185: 5-(carboxyamino)imidazole ribonucleotide synthase
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli

27% id,
94% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory