Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 13 curated entries in PaperBLAST's database that match '3.1.1.15' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_06301: L-arabinonolactonase (EC 3.1.1.15)
is similar to:
PaperBLAST

ARALA_AZOBR / Q1JUP5: L-arabinolactonase; EC 3.1.1.15 from Azospirillum brasilense

64% id,
98% cov

HSERO_RS05225: L-arabinolactonase (EC 3.1.1.15) from Herbaspirillum seropedicae

53% id,
100% cov

Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp.

36% id,
97% cov

More...

H281DRAFT_05978: Sugar lactone lactonase YvrE
is similar to:
PaperBLAST

HSERO_RS05225: L-arabinolactonase (EC 3.1.1.15) from Herbaspirillum seropedicae

39% id,
96% cov

Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp.

36% id,
96% cov

Shewana3_2088: L-arabinolactonase (EC 3.1.1.15) from Shewanella sp.

36% id,
93% cov

More...

H281DRAFT_01183: Sugar lactone lactonase YvrE
is similar to:
PaperBLAST

HSERO_RS05225: L-arabinolactonase (EC 3.1.1.15) from Herbaspirillum seropedicae

36% id,
99% cov

PS417_11020: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas simiae

36% id,
96% cov

PfGW456L13_2118: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens

35% id,
95% cov

More...

H281DRAFT_05322: gluconolactonase (EC 3.1.1.17)
is similar to:
PaperBLAST

HSERO_RS05225: L-arabinolactonase (EC 3.1.1.15) from Herbaspirillum seropedicae

35% id,
96% cov

ARALA_AZOBR / Q1JUP5: L-arabinolactonase; EC 3.1.1.15 from Azospirillum brasilense

33% id,
99% cov

Pf1N1B4_413: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens

36% id,
89% cov

More...

H281DRAFT_05960: gluconolactonase (EC 3.1.1.17)
is similar to:
PaperBLAST

Pf6N2E2_5966: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens

26% id,
92% cov

H281DRAFT_03243: hypothetical protein
is similar to:
PaperBLAST

XACC_HALVD / D4GP31: Pentonolactonase XacC; L-arabinonolactonase; Xylono-1,4-lactonase; EC 3.1.1.15; EC 3.1.1.68 from Haloferax volcanii
xacC / D4GP31: D-xylono/L-arabinono-1,4-lactonase (EC 3.1.1.15; EC 3.1.1.68) from Haloferax volcanii
D4GP31: L-arabinonolactonase (EC 3.1.1.15); xylono-1,4-lactonase (EC 3.1.1.68) from Haloferax volcanii

31% id,
26% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory