Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 320 curated entries in PaperBLAST's database that match '3.2.1.23' as complete word(s).

These curated entries have 251 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_02633: beta-galactosidase
is similar to:
PaperBLAST

BGAL_THETH / O69315: Beta-galactosidase; Beta-gal; Lactase; EC 3.2.1.23 from Thermus thermophilus
BAA28362.1: β-galactosidase (A4-β-Gal) (EC 3.2.1.23)

53% id,
100% cov

ABI35985.1: β-galactosidase (EC 3.2.1.23)

53% id,
100% cov

BGAL1_THESP / Q8GEA9: Beta-galactosidase BgaA; Beta-gal; EC 3.2.1.23 from Thermus sp.
AAN05443.1: β-galactosidase (BgaA) (EC 3.2.1.23)

52% id,
100% cov

More...

H281DRAFT_03229: beta-galactosidase
is similar to:
PaperBLAST

BGAL_THETH / O69315: Beta-galactosidase; Beta-gal; Lactase; EC 3.2.1.23 from Thermus thermophilus
BAA28362.1: β-galactosidase (A4-β-Gal) (EC 3.2.1.23)

53% id,
100% cov

ABI35985.1: β-galactosidase (EC 3.2.1.23)

52% id,
100% cov

BGAL1_THESP / Q8GEA9: Beta-galactosidase BgaA; Beta-gal; EC 3.2.1.23 from Thermus sp.
AAN05443.1: β-galactosidase (BgaA) (EC 3.2.1.23)

52% id,
100% cov

More...

H281DRAFT_01455: beta-glucosidase
is similar to:
PaperBLAST

ABI35984.1: β-glycosidase (β-gly) (EC 3.2.1.21|3.2.1.23)

49% id,
99% cov

ACL74759.1: cellodextrin glucohydrolase (Ccel_0374) (EC 3.2.1.21|3.2.1.23|3.2.1.74)

43% id,
99% cov

AEQ38581.1: β-galactosidase (Mbgl) (EC 3.2.1.23)

40% id,
99% cov

More...

H281DRAFT_02504: Alkylhydroperoxidase family enzyme, contains CxxC motif
is similar to:
PaperBLAST

Q8DR24: beta-galactosidase (EC 3.2.1.23) from Streptococcus pneumoniae

37% id,
96% cov

H281DRAFT_00016: beta-glucosidase
is similar to:
PaperBLAST

ADT80794.1: α-L-arabinopyranosidase / β-galactosidase (Apy;Apy-H1) (EC 3.2.1.23|3.2.1.-)

33% id,
88% cov

H281DRAFT_03494: Alkylhydroperoxidase family enzyme, contains CxxC motif
is similar to:
PaperBLAST

Q8DR24: beta-galactosidase (EC 3.2.1.23) from Streptococcus pneumoniae

26% id,
100% cov

H281DRAFT_05867: uncharacterized peroxidase-related enzyme
is similar to:
PaperBLAST

Q8DR24: beta-galactosidase (EC 3.2.1.23) from Streptococcus pneumoniae

24% id,
91% cov

H281DRAFT_02634: Beta-galactosidase
is similar to:
PaperBLAST

ADX59436.1: β-galactosidase (BgaL) (EC 3.2.1.23)

36% id,
50% cov

CAZ44333.1: β-galactosidase; β-D-fucosidase (GalF) (EC 3.2.1.23|3.2.1.38)

28% id,
60% cov

BGAL_CANLF / Q9TRY9: Beta-galactosidase; Acid beta-galactosidase; Lactase; EC 3.2.1.23 from Canis lupus
AAE53102.1: β-galactosidase (Glb1) (EC 3.2.1.23)

27% id,
51% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory