Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 134 curated entries in PaperBLAST's database that match '3.2.1.28' as complete word(s).

These curated entries have 79 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_02853: alpha,alpha-trehalase
is similar to:
PaperBLAST

Q63MI6: alpha,alpha-trehalase (EC 3.2.1.28) from Burkholderia pseudomallei

77% id,
90% cov

AO356_24205: Alpha,alpha-trehalase (EC 3.2.1.28) from Pseudomonas fluorescens

54% id,
98% cov

Q3BXX2: alpha,alpha-trehalase (EC 3.2.1.28) from Xanthomonas campestris

58% id,
89% cov

More...

H281DRAFT_02777: alpha-glucosidase
is similar to:
PaperBLAST

AAS80455.1: α,α-trehalase / α-glucosidase (TTC0107) (EC 3.2.1.20|3.2.1.28)

59% id,
96% cov

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

46% id,
90% cov

H281DRAFT_02882: alpha,alpha-trehalase
is similar to:
PaperBLAST

Q3BXX2: alpha,alpha-trehalase (EC 3.2.1.28) from Xanthomonas campestris

51% id,
94% cov

AO356_24205: Alpha,alpha-trehalase (EC 3.2.1.28) from Pseudomonas fluorescens

49% id,
96% cov

Q63MI6: alpha,alpha-trehalase (EC 3.2.1.28) from Burkholderia pseudomallei

48% id,
98% cov

More...

H281DRAFT_00297: Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family
is similar to:
PaperBLAST

TREH_MYCTU / P71741: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Mycobacterium tuberculosis

38% id,
94% cov

TREH_MYCS2 / A0R0W9: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Mycolicibacterium smegmatis
ABK72415.1: α,α-trehalase (MSMEG_4535;MSMEG4528) (EC 3.2.1.28)

38% id,
93% cov

TREH_THEAC / Q9HLE2: Trehalase; Alpha,alpha-trehalase; EC 3.2.1.28 from Thermoplasma acidophilum

34% id,
99% cov

More...

H281DRAFT_00688: Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family
is similar to:
PaperBLAST

TREH_THEVO / Q978S7: Trehalase; Alpha,alpha-trehalase; EC 3.2.1.28 from Thermoplasma volcanium

36% id,
93% cov

TREH_MYCS2 / A0R0W9: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Mycolicibacterium smegmatis
ABK72415.1: α,α-trehalase (MSMEG_4535;MSMEG4528) (EC 3.2.1.28)

35% id,
93% cov

TREH1_SULAC / Q4J7W0: Trehalase 1; Alpha,alpha-trehalase; SaTreH1; EC 3.2.1.28 from Sulfolobus acidocaldarius
A0A2Z5U3T3: alpha,alpha-trehalase (EC 3.2.1.28) from Sulfolobus acidocaldarius

33% id,
97% cov

More...

H281DRAFT_05477: Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family
is similar to:
PaperBLAST

TREH_MYCTU / P71741: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Mycobacterium tuberculosis

37% id,
89% cov

TREH_THEAC / Q9HLE2: Trehalase; Alpha,alpha-trehalase; EC 3.2.1.28 from Thermoplasma acidophilum

33% id,
99% cov

TREH_MYCS2 / A0R0W9: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Mycolicibacterium smegmatis
ABK72415.1: α,α-trehalase (MSMEG_4535;MSMEG4528) (EC 3.2.1.28)

34% id,
91% cov

More...

H281DRAFT_06049: trehalose synthase
is similar to:
PaperBLAST

AAS80455.1: α,α-trehalase / α-glucosidase (TTC0107) (EC 3.2.1.20|3.2.1.28)

37% id,
63% cov

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

42% id,
42% cov

H281DRAFT_02776: maltose alpha-D-glucosyltransferase/ alpha-amylase
is similar to:
PaperBLAST

AAS80455.1: α,α-trehalase / α-glucosidase (TTC0107) (EC 3.2.1.20|3.2.1.28)

46% id,
38% cov

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

45% id,
37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

317227-319353 (frame -1) on H281DRAFT_scaffold00001.1
is similar to:
PaperBLAST

TREH_MYCS2 / A0R0W9: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Mycolicibacterium smegmatis
ABK72415.1: α,α-trehalase (MSMEG_4535;MSMEG4528) (EC 3.2.1.28)
Also see hits to annotated proteins above

37% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory