Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 37 curated entries in PaperBLAST's database that match '3.5.1.25'.

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_01979: N-acetylglucosamine 6-phosphate deacetylase
is similar to:
PaperBLAST

BPHYT_RS02730: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Burkholderia phytofirmans

96% id,
100% cov

PS417_22985: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas simiae

69% id,
99% cov

PfGW456L13_4830: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas fluorescens

68% id,
99% cov

More...

H281DRAFT_05506: N-acetylglucosamine 6-phosphate deacetylase (EC 3.5.1.25)
is similar to:
PaperBLAST

BPHYT_RS02730: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Burkholderia phytofirmans

57% id,
98% cov

PS417_22985: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas simiae

56% id,
98% cov

AO356_17550: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas fluorescens

56% id,
98% cov

More...

H281DRAFT_02619: N-acyl-D-amino-acid deacylase
is similar to:
PaperBLAST

BPHYT_RS02730: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Burkholderia phytofirmans

28% id,
37% cov

Q8Y8E8: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Listeria monocytogenes

31% id,
24% cov

H281DRAFT_01891: N-acyl-D-amino-acid deacylase
is similar to:
PaperBLAST

Q8Y8E8: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Listeria monocytogenes

35% id,
24% cov

H281DRAFT_00381: dihydropyrimidinase
is similar to:
PaperBLAST

NAGA_BACSU / O34450: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Bacillus subtilis
CAB15506.1: N-acetylglucosamine 6-phosphate deacetylase (NagA;BSU35010) (EC 3.5.1.25)

36% id,
11% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory