Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 6 curated entries in PaperBLAST's database that match '3.5.1.53' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_05434: Predicted amidohydrolase
is similar to:
PaperBLAST

AGUB_SOLLC / Q9XGI9: N-carbamoylputrescine amidase; EC 3.5.1.53 from Solanum lycopersicum

31% id,
91% cov

NILP1_ARATH / Q8VYF5: N-carbamoylputrescine amidase; Nitrilase-like protein 1; EC 3.5.1.53 from Arabidopsis thaliana
At2g27450 / Q8VYF5: At2g27450-monomer (EC 3.5.1.53) from Arabidopsis thaliana

31% id,
90% cov

H281DRAFT_04689: nitrilase
is similar to:
PaperBLAST

NILP1_ARATH / Q8VYF5: N-carbamoylputrescine amidase; Nitrilase-like protein 1; EC 3.5.1.53 from Arabidopsis thaliana
At2g27450 / Q8VYF5: At2g27450-monomer (EC 3.5.1.53) from Arabidopsis thaliana

29% id,
95% cov

Q5KR04: N-carbamoylputrescine amidase (EC 3.5.1.53) from Selenomonas ruminantium

27% id,
86% cov

H281DRAFT_03488: Predicted amidohydrolase
is similar to:
PaperBLAST

C8J_0890 / A0A1J6PBK3: N-carbamoylputrescine amidohydrolase (EC 3.5.1.53) from Campylobacter jejuni

23% id,
96% cov

H281DRAFT_02936: nitrilase
is similar to:
PaperBLAST

C8J_0890 / A0A1J6PBK3: N-carbamoylputrescine amidohydrolase (EC 3.5.1.53) from Campylobacter jejuni

28% id,
55% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory