Curated BLAST for Genomes


Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 16 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_04869: imidazolonepropionase
is similar to:

RR42_RS16905: Imidazolonepropionase (EC from Cupriavidus basilensis

74% id,
95% cov

Pf1N1B4_1579: Imidazolonepropionase (EC from Pseudomonas fluorescens

61% id,
99% cov

AO356_09595: Imidazolonepropionase (EC from Pseudomonas fluorescens

60% id,
100% cov


H281DRAFT_04916: Imidazolonepropionase
is similar to:

Ga0059261_3964: Imidazolonepropionase (EC from Sphingomonas koreensis

27% id,
31% cov

H281DRAFT_01102: hypothetical protein
is similar to:

SM_b21166: Imidazolonepropionase (EC from Sinorhizobium meliloti

30% id,
20% cov

HUTI_AGRFC / Q8U8Z6: Imidazolonepropionase; Imidazolone-5-propanoate hydrolase; Imidazolone-5-propionate hydrolase; EC from Agrobacterium fabrum
Q8U8Z6: imidazolonepropionase (EC from Agrobacterium tumefaciens

32% id,
17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory