Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 65 curated entries in PaperBLAST's database that match '3.5.3.1' as complete word(s).

These curated entries have 50 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_00178: agmatinase is similar to:	PaperBLAST
GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens	62% id, 90% cov
GDAH_MOUSE / A2AS89: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Mus musculus	61% id, 84% cov
A4IJM8: arginase (EC 3.5.3.1) from Geobacillus thermodenitrificans	31% id, 97% cov
ARGI_BACCD / P53608: Arginase; EC 3.5.3.1 from Bacillus caldovelox P53608: arginase (EC 3.5.3.1) from [Bacillus] caldovelox	31% id, 97% cov
ARGI_BACSU / P39138: Arginase; EC 3.5.3.1 from Bacillus subtilis argI / P39138: arginase (EC 3.5.3.1) from Bacillus subtilis P39138: arginase (EC 3.5.3.1) from Bacillus subtilis	28% id, 96% cov
N515DRAFT_0348: Arginase (EC 3.5.3.1) from Dyella japonica	28% id, 95% cov
ARG2 / Q5UNS1: arginase (EC 3.5.3.1) from Solanum lycopersicum Q5UNS1: arginase (EC 3.5.3.1) from Solanum lycopersicum	33% id, 80% cov
ARGI1_ARATH / P46637: Arginase 1, mitochondrial; Agmatinase ARGAH1; Arginine amidohydrolase 1; AtARGAH1; EC 3.5.3.1; EC 3.5.3.11 from Arabidopsis thaliana arginase / P46637: arginase (EC 3.5.3.1) from Arabidopsis thaliana	32% id, 83% cov
ARGI_MEDTR / G7JFU5: Arginase, mitochondrial; Agmatinase ARGAH; Arginine amidohydrolase; MtARGAH; EC 3.5.3.1; EC 3.5.3.11 from Medicago truncatula	30% id, 86% cov
ARGI1_ORYSI / B8AU84: Arginase 1, mitochondrial; Arginine amidohydrolase 1; EC 3.5.3.1 from Oryza sativa	33% id, 80% cov
U6BQJ3: arginase (EC 3.5.3.1) from Heteropneustes fossilis	28% id, 95% cov
ARG1 / Q5UNS2: arginase (EC 3.5.3.1) from Solanum lycopersicum Q5UNS2: arginase (EC 3.5.3.1) from Solanum lycopersicum	32% id, 80% cov
ARGI1_MOUSE / Q61176: Arginase-1; Liver-type arginase; Type I arginase; EC 3.5.3.1 from Mus musculus Q61176: arginase (EC 3.5.3.1) from Mus musculus	26% id, 96% cov
ARGI1_HUMAN / P05089: Arginase-1; Liver-type arginase; Type I arginase; EC 3.5.3.1 from Homo sapiens ARG1 / P05089: Arginase-1 (EC 3.5.3.1) from Homo sapiens P05089: arginase (EC 3.5.3.1) from Homo sapiens	26% id, 94% cov
O08701: arginase (EC 3.5.3.1) from Rattus norvegicus	29% id, 82% cov
ARGI2_ARATH / Q9ZPF5: Arginase 2, chloroplastic/mitochondrial; Agmatinase ARGAH2; Arginine amidohydrolase 2; EC 3.5.3.1; EC 3.5.3.11 from Arabidopsis thaliana	29% id, 82% cov
A0A1S3R1W2: arginase (EC 3.5.3.1) from Salmo salar	25% id, 93% cov
ARGI_KLULA / Q6CLS8: Arginase; EC 3.5.3.1 from Kluyveromyces lactis	27% id, 86% cov
A0A1P8DAM2: arginase (EC 3.5.3.1) from Oncorhynchus mykiss	25% id, 93% cov
ARGI_ENTH1 / C4LSS0: Arginase; EhArg; EC 3.5.3.1 from Entamoeba histolytica C4LSS0: arginase (EC 3.5.3.1) from Entamoeba histolytica	23% id, 98% cov
C0H9C1: arginase (EC 3.5.3.1) from Salmo salar	25% id, 92% cov
ARGI2_MOUSE / O08691: Arginase-2, mitochondrial; Arginase II; Kidney-type arginase; Non-hepatic arginase; Type II arginase; EC 3.5.3.1 from Mus musculus	26% id, 87% cov
A0A060YSI8: arginase (EC 3.5.3.1) from Oncorhynchus mykiss	24% id, 93% cov
A0A1P8DAN3: arginase (EC 3.5.3.1) from Oncorhynchus mykiss	26% id, 86% cov
A0A0D5ZYA4: arginase (EC 3.5.3.1) from Heteropneustes fossilis	26% id, 85% cov
ARGI2_HUMAN / P78540: Arginase-2, mitochondrial; Arginase II; Kidney-type arginase; Non-hepatic arginase; Type II arginase; EC 3.5.3.1 from Homo sapiens ARG2 / P78540: Arginase-2, mitochondrial (EC 3.5.3.1) from Homo sapiens P78540: arginase (EC 3.5.3.1) from Homo sapiens	25% id, 90% cov
Q4A3J2: arginase (EC 3.5.3.1) from Cyprinus carpio	26% id, 86% cov
A0A1S3NED8: arginase (EC 3.5.3.1) from Salmo salar	25% id, 86% cov
car1 / RF\|NP_595133.1: arginase Car1; EC 3.5.3.1 from Schizosaccharomyces pombe	25% id, 85% cov
Q4VK78: arginase (EC 3.5.3.1) from Oryctolagus cuniculus	24% id, 87% cov
agaA: arginase; EC 3.5.3.1 from Emericella nidulans	31% id, 67% cov
car3 / RF\|NP_593549.1: arginase Aru1; EC 3.5.3.1 from Schizosaccharomyces pombe	24% id, 85% cov
ARGI1_XENLA / P30759: Arginase-1; Arginase, hepatic; Type I arginase; EC 3.5.3.1 from Xenopus laevis	24% id, 77% cov
ARGI_YEAST / P00812: Arginase; EC 3.5.3.1 from Saccharomyces cerevisiae CAR1 / P00812: arginase subunit (EC 3.5.3.1) from Saccharomyces cerevisiae	30% id, 61% cov
O96394: arginase (EC 3.5.3.1) from Leishmania amazonensis	32% id, 56% cov
Q6TUJ5: arginase (EC 3.5.3.1) from Leishmania mexicana	32% id, 56% cov
A0A145YEM9: arginase (EC 3.5.3.1) from Leishmania infantum	31% id, 56% cov
ARGI_NEUCR / P33280: Arginase; EC 3.5.3.1 from Neurospora crassa	31% id, 53% cov
ARGI1_MOUSE / Q61176: Arginase-1; Liver-type arginase; Type I arginase; EC 3.5.3.1 from Mus musculus Q61176: arginase (EC 3.5.3.1) from Mus musculus	27% id, 44% cov
ARGI1_RAT / P07824: Arginase-1; Liver-type arginase; Type I arginase; EC 3.5.3.1 from Rattus norvegicus P07824: arginase (EC 3.5.3.1) from Rattus norvegicus	25% id, 44% cov
Q4A3J1: arginase (EC 3.5.3.1) from Cyprinus carpio	28% id, 37% cov
Q4A4U9: arginase (EC 3.5.3.1) from Cyprinus carpio	27% id, 37% cov
Q4A3J0: arginase (EC 3.5.3.1) from Cyprinus carpio	27% id, 37% cov
More...

H281DRAFT_03347: formiminoglutamase is similar to:	PaperBLAST
ARGI_PLAF7 / Q8I384: Arginase; PFA; PfArg; EC 3.5.3.1 from Plasmodium falciparum Q8I384: arginase (EC 3.5.3.1) from Plasmodium falciparum	20% id, 46% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

192021-193040 (frame +3) on H281DRAFT_scaffold00001.1 is similar to:	PaperBLAST
GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens Also see hits to annotated proteins above	60% id, 93% cov
Q6WVP6: arginase (EC 3.5.3.1) from Schistosoma mansoni	25% id, 82% cov
Q4A3J0: arginase (EC 3.5.3.1) from Cyprinus carpio Also see hits to annotated proteins above	28% id, 40% cov
Q4A4U9: arginase (EC 3.5.3.1) from Cyprinus carpio Also see hits to annotated proteins above	29% id, 39% cov
Q4A3J1: arginase (EC 3.5.3.1) from Cyprinus carpio Also see hits to annotated proteins above	29% id, 39% cov
More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory