Curated BLAST
Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)
Found 20 curated entries in PaperBLAST's database that match '3.5.3.11' as complete word(s).
These curated entries have 14 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query
H281DRAFT_00178: agmatinase
is similar to: | PaperBLAST |
SPEB_HUMAN / Q9BSE5: Agmatinase, mitochondrial; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Homo sapiens
AGMAT / Q9BSE5: agmatinase (EC 3.5.3.11) from Homo sapiens
Q9BSE5: agmatinase (EC 3.5.3.11) from Homo sapiens | 62% id,
90% cov |
W5PHZ9: agmatinase (EC 3.5.3.11) from Ovis aries | 64% id,
86% cov |
SPEB_MOUSE / A2AS89: Agmatinase, mitochondrial; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Mus musculus | 61% id,
84% cov |
SPEB_ECOLI / P60651: Agmatinase; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Escherichia coli
SpeB / b2937: agmatinase (EC 3.5.3.11) from Escherichia coli
speB / RF|NP_417412: agmatinase; EC 3.5.3.11 from Escherichia coli
speB / P60651: agmatinase (EC 3.5.3.11) from Escherichia coli | 43% id,
92% cov |
SPEB_PROMI / Q7X3P1: Agmatinase; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Proteus mirabilis | 42% id,
86% cov |
speB / P70999: agmatinase (EC 3.5.3.11) from Bacillus subtilis | 36% id,
92% cov |
D4GWG4: agmatinase (EC 3.5.3.11) from Haloferax volcanii | 33% id,
94% cov |
SPEB_METJA / Q57757: Agmatinase; EC 3.5.3.11 from Methanocaldococcus jannaschii
Q57757: agmatinase (EC 3.5.3.11) from Methanocaldococcus jannaschii | 31% id,
93% cov |
AGMT_PYRHO / O57839: Agmatinase; EC 3.5.3.11 from Pyrococcus horikoshii | 30% id,
95% cov |
SPEBH_THEKO / Q5JI38: N(1)-aminopropylagmatine ureohydrolase; Agmatinase; Protein SpeB homolog; EC 3.5.3.24; EC 3.5.3.11 from Thermococcus kodakarensis | 31% id,
88% cov |
ARGI1_ARATH / P46637: Arginase 1, mitochondrial; Agmatinase ARGAH1; Arginine amidohydrolase 1; AtARGAH1; EC 3.5.3.1; EC 3.5.3.11 from Arabidopsis thaliana | 32% id,
83% cov |
ARGI_MEDTR / G7JFU5: Arginase, mitochondrial; Agmatinase ARGAH; Arginine amidohydrolase; MtARGAH; EC 3.5.3.1; EC 3.5.3.11 from Medicago truncatula | 30% id,
86% cov |
ARGI2_ARATH / Q9ZPF5: Arginase 2, chloroplastic/mitochondrial; Agmatinase ARGAH2; Arginine amidohydrolase 2; EC 3.5.3.1; EC 3.5.3.11 from Arabidopsis thaliana | 29% id,
82% cov |
Q8YUM9: agmatinase (EC 3.5.3.11) from Anabaena sp. | 31% id,
49% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory