Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 12 curated entries in PaperBLAST's database that match '3.5.3.13' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_04868: formimidoylglutamate deiminase (EC 3.5.3.13)
is similar to:
PaperBLAST

Pf6N2E2_3808: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

54% id,
100% cov

AO356_09645: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

53% id,
100% cov

PfGW456L13_330: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

53% id,
100% cov

More...

H281DRAFT_01069: Cytosine/adenosine deaminase
is similar to:
PaperBLAST

Pf1N1B4_1591: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

23% id,
91% cov

hutF / Q4KJP1: formiminoglutamate deiminase subunit (EC 3.5.3.13) from Pseudomonas fluorescens

26% id,
54% cov

AO353_12235: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

25% id,
54% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory