Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)
Found 12 curated entries in PaperBLAST's database that match '4.1.3.17' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query
| H281DRAFT_03419: 4-carboxy-4-hydroxy-2-oxoadipate aldolase (EC 4.1.3.-) is similar to: | PaperBLAST |
HMGA_PSEOC / Q9AQI0: 4-hydroxy-4-methyl-2-oxoglutarate aldolase/4-carboxy-4-hydroxy-2-oxoadipate aldolase; HMG/CHA aldolase; 4-hydroxy-2-oxoglutarate aldolase; Oxaloacetate decarboxylase; OAA decarboxylase; EC 4.1.3.16; EC 4.1.3.17; EC 4.1.1.112 from Pseudomonas straminea | 82% id, 100% cov |
pmdF / Q93PS8: HMG aldolase monomer (EC 4.1.3.17) from Comamonas testosteroni | 81% id, 100% cov |
LIGK_SPHSK / G2IQQ8: 4-carboxy-4-hydroxy-2-oxoadipate aldolase; CHA aldolase; Oxaloacetate decarboxylase; OAA decarboxylase; EC 4.1.3.17; EC 4.1.1.112 from Sphingobium sp. | 67% id, 98% cov |
| H281DRAFT_03361: 2-keto-3-deoxy-L-rhamnonate aldolase RhmA is similar to: | PaperBLAST |
TASA_HAPIR / A0A0F7GG11: 4-hydroxy-4-methyl-2-oxoglutarate aldolase tasA; Tetramic acid Sch210971/2 biosynthesis cluster protein A; EC 4.1.3.17 from Hapsidospora irregularis | 39% id, 100% cov |
CGHB_CHAGB / Q2HBN5: 4-hydroxy-4-methyl-2-oxoglutarate aldolase cghB; Sch210972 biosynthesis cluster protein B; EC 4.1.3.17 from Chaetomium globosum | 38% id, 92% cov |
| H281DRAFT_06356: RraA famliy is similar to: | PaperBLAST |
RRAAH_THET8 / Q5SIP7: 4-hydroxy-4-methyl-2-oxoglutarate aldolase; HMG aldolase; Oxaloacetate decarboxylase; OAA decarboxylase; Regulator of ribonuclease activity homolog; EC 4.1.3.17; EC 4.1.1.112 from Thermus thermophilus | 32% id, 99% cov |
HMGA_PSEOC / Q9AQI0: 4-hydroxy-4-methyl-2-oxoglutarate aldolase/4-carboxy-4-hydroxy-2-oxoadipate aldolase; HMG/CHA aldolase; 4-hydroxy-2-oxoglutarate aldolase; Oxaloacetate decarboxylase; OAA decarboxylase; EC 4.1.3.16; EC 4.1.3.17; EC 4.1.1.112 from Pseudomonas straminea | 35% id, 88% cov |
pmdF / Q93PS8: HMG aldolase monomer (EC 4.1.3.17) from Comamonas testosteroni | 35% id, 88% cov |
| H281DRAFT_06498: Regulator of RNase E activity RraA is similar to: | PaperBLAST |
RRAAH_THET8 / Q5SIP7: 4-hydroxy-4-methyl-2-oxoglutarate aldolase; HMG aldolase; Oxaloacetate decarboxylase; OAA decarboxylase; Regulator of ribonuclease activity homolog; EC 4.1.3.17; EC 4.1.1.112 from Thermus thermophilus | 34% id, 89% cov |
LIGK_SPHSK / G2IQQ8: 4-carboxy-4-hydroxy-2-oxoadipate aldolase; CHA aldolase; Oxaloacetate decarboxylase; OAA decarboxylase; EC 4.1.3.17; EC 4.1.1.112 from Sphingobium sp. | 33% id, 89% cov |
HMGA_PSEOC / Q9AQI0: 4-hydroxy-4-methyl-2-oxoglutarate aldolase/4-carboxy-4-hydroxy-2-oxoadipate aldolase; HMG/CHA aldolase; 4-hydroxy-2-oxoglutarate aldolase; Oxaloacetate decarboxylase; OAA decarboxylase; EC 4.1.3.16; EC 4.1.3.17; EC 4.1.1.112 from Pseudomonas straminea | 32% id, 89% cov |
| H281DRAFT_03252: 2,4-dihydroxyhept-2-enedioate aldolase (EC 4.1.2.-) is similar to: | PaperBLAST |
CGHB_CHAGB / Q2HBN5: 4-hydroxy-4-methyl-2-oxoglutarate aldolase cghB; Sch210972 biosynthesis cluster protein B; EC 4.1.3.17 from Chaetomium globosum | 33% id, 90% cov |
TASA_HAPIR / A0A0F7GG11: 4-hydroxy-4-methyl-2-oxoglutarate aldolase tasA; Tetramic acid Sch210971/2 biosynthesis cluster protein A; EC 4.1.3.17 from Hapsidospora irregularis | 31% id, 87% cov |
| H281DRAFT_05962: RraA famliy is similar to: | PaperBLAST |
HMGA_PSEP1 / A5W059: 4-hydroxy-4-methyl-2-oxoglutarate aldolase/4-carboxy-4-hydroxy-2-oxoadipate aldolase; HMG/CHA aldolase; Oxaloacetate decarboxylase; OAA decarboxylase; EC 4.1.3.17; EC 4.1.1.112 from Pseudomonas putida | 33% id, 89% cov |
| H281DRAFT_03423: Regulator of RNase E activity RraA is similar to: | PaperBLAST |
GALC_PSEPK / Q88JX9: 4-carboxy-4-hydroxy-2-oxoadipic acid aldolase; CHA aldolase; Gallate degradation protein C; EC 4.1.3.17 from Pseudomonas putida | 31% id, 81% cov |
HMGA_PSEP1 / A5W059: 4-hydroxy-4-methyl-2-oxoglutarate aldolase/4-carboxy-4-hydroxy-2-oxoadipate aldolase; HMG/CHA aldolase; Oxaloacetate decarboxylase; OAA decarboxylase; EC 4.1.3.17; EC 4.1.1.112 from Pseudomonas putida | 30% id, 79% cov |
pmdF / Q93PS8: HMG aldolase monomer (EC 4.1.3.17) from Comamonas testosteroni | 27% id, 85% cov |
| H281DRAFT_05453: 4-hydroxy-2-oxoheptanedioate aldolase is similar to: | PaperBLAST |
CGHB_CHAGB / Q2HBN5: 4-hydroxy-4-methyl-2-oxoglutarate aldolase cghB; Sch210972 biosynthesis cluster protein B; EC 4.1.3.17 from Chaetomium globosum | 30% id, 75% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 103629-104348 (frame -3) on H281DRAFT_scaffold00016.16 is similar to: | PaperBLAST |
GALC_PSEPK / Q88JX9: 4-carboxy-4-hydroxy-2-oxoadipic acid aldolase; CHA aldolase; Gallate degradation protein C; EC 4.1.3.17 from Pseudomonas putida | 37% id, 100% cov |
Lawrence Berkeley National Laboratory