Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)
Found 14 curated entries in PaperBLAST's database that match '4.2.1.25' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 16 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query
| H281DRAFT_02329: dihydroxyacid dehydratase is similar to: | PaperBLAST |
BPHYT_RS19730: L-arabonate dehydratase (EC 4.2.1.25) from Burkholderia phytofirmans | 98% id, 100% cov |
SM_b20890: L-arabonate dehydratase (EC 4.2.1.25) from Sinorhizobium meliloti | 67% id, 100% cov |
PfGW456L13_3320: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas fluorescens | 68% id, 99% cov |
| H281DRAFT_03422: dihydroxyacid dehydratase (EC 4.2.1.9) is similar to: | PaperBLAST |
BPHYT_RS19730: L-arabonate dehydratase (EC 4.2.1.25) from Burkholderia phytofirmans | 50% id, 99% cov |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 50% id, 98% cov |
AO356_24585: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas fluorescens | 50% id, 98% cov |
| H281DRAFT_06137: dihydroxyacid dehydratase (EC 4.2.1.9) is similar to: | PaperBLAST |
PS417_11000: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas simiae | 49% id, 97% cov |
BPHYT_RS19730: L-arabonate dehydratase (EC 4.2.1.25) from Burkholderia phytofirmans | 47% id, 98% cov |
Pf6N2E2_609: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas fluorescens | 48% id, 96% cov |
| H281DRAFT_05919: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
BPHYT_RS19730: L-arabonate dehydratase (EC 4.2.1.25) from Burkholderia phytofirmans | 46% id, 99% cov |
SM_b20890: L-arabonate dehydratase (EC 4.2.1.25) from Sinorhizobium meliloti | 45% id, 99% cov |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 44% id, 99% cov |
| H281DRAFT_00127: dihydroxyacid dehydratase is similar to: | PaperBLAST |
SM_b20890: L-arabonate dehydratase (EC 4.2.1.25) from Sinorhizobium meliloti | 38% id, 96% cov |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 37% id, 96% cov |
BPHYT_RS19730: L-arabonate dehydratase (EC 4.2.1.25) from Burkholderia phytofirmans | 37% id, 92% cov |
| H281DRAFT_04215: galactonate dehydratase is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 36% id, 97% cov |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 31% id, 88% cov |
| H281DRAFT_00974: L-alanine-DL-glutamate epimerase is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 36% id, 93% cov |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 32% id, 91% cov |
| H281DRAFT_05312: dihydroxyacid dehydratase is similar to: | PaperBLAST |
BPHYT_RS19730: L-arabonate dehydratase (EC 4.2.1.25) from Burkholderia phytofirmans | 30% id, 93% cov |
ARADA_AZOBR / Q1JUQ1: L-arabonate dehydratase; L-arabinonate dehydratase; EC 4.2.1.25 from Azospirillum brasilense | 33% id, 62% cov |
AO356_24585: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas fluorescens | 31% id, 64% cov |
| H281DRAFT_04278: 6-phosphogluconate dehydratase is similar to: | PaperBLAST |
BPHYT_RS19730: L-arabonate dehydratase (EC 4.2.1.25) from Burkholderia phytofirmans | 29% id, 91% cov |
Shewana3_2070: L-arabonate dehydratase (EC 4.2.1.25) from Shewanella sp. | 28% id, 92% cov |
HSERO_RS05205: L-arabonate dehydratase (EC 4.2.1.25) from Herbaspirillum seropedicae | 27% id, 92% cov |
| H281DRAFT_06497: L-alanine-DL-glutamate epimerase is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 29% id, 90% cov |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 26% id, 85% cov |
| H281DRAFT_01518: D-mannonate dehydratase (EC 4.2.1.8) is similar to: | PaperBLAST |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 29% id, 86% cov |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 28% id, 86% cov |
| H281DRAFT_05472: L-alanine-DL-glutamate epimerase is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 25% id, 87% cov |
| H281DRAFT_01228: L-rhamnonate dehydratase is similar to: | PaperBLAST |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 26% id, 83% cov |
| H281DRAFT_01645: muconate cycloisomerase (EC 5.5.1.1) is similar to: | PaperBLAST |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 23% id, 86% cov |
| H281DRAFT_03815: D-glucarate dehydratase is similar to: | PaperBLAST |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 26% id, 75% cov |
| H281DRAFT_01717: L-alanine-DL-glutamate epimerase is similar to: | PaperBLAST |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 22% id, 73% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 14 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory