Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 10 curated entries in PaperBLAST's database that match '4.2.1.44' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_04457: 2-keto-myo-inositol dehydratase
is similar to:
PaperBLAST

BPHYT_RS13920: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Burkholderia phytofirmans

91% id,
100% cov

HSERO_RS12135: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Herbaspirillum seropedicae

71% id,
99% cov

AO353_21340: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas fluorescens

66% id,
97% cov

More...

H281DRAFT_00107: Sugar phosphate isomerase/epimerase
is similar to:
PaperBLAST

AO356_23165: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas fluorescens

22% id,
76% cov

AO353_21340: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas fluorescens

24% id,
58% cov

Pf6N2E2_513: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas fluorescens

24% id,
57% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory