Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 1 curated entries in PaperBLAST's database that match '4.2.1.52' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_00509: dihydrodipicolinate synthase
is similar to:
PaperBLAST

dapA2: dihydrodipicolinate synthase; EC 4.2.1.52 from Bacillus anthracis

40% id,
98% cov

H281DRAFT_01480: 4-hydroxy-tetrahydrodipicolinate synthase
is similar to:
PaperBLAST

dapA2: dihydrodipicolinate synthase; EC 4.2.1.52 from Bacillus anthracis

30% id,
97% cov

H281DRAFT_00991: 4-hydroxy-tetrahydrodipicolinate synthase
is similar to:
PaperBLAST

dapA2: dihydrodipicolinate synthase; EC 4.2.1.52 from Bacillus anthracis

30% id,
96% cov

H281DRAFT_01829: 4-hydroxy-tetrahydrodipicolinate synthase
is similar to:
PaperBLAST

dapA2: dihydrodipicolinate synthase; EC 4.2.1.52 from Bacillus anthracis

25% id,
97% cov

H281DRAFT_03220: 4-hydroxy-tetrahydrodipicolinate synthase
is similar to:
PaperBLAST

dapA2: dihydrodipicolinate synthase; EC 4.2.1.52 from Bacillus anthracis

24% id,
77% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory