Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)
Found 10 curated entries in PaperBLAST's database that match '4.2.1.6' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 16 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query
| H281DRAFT_04215: galactonate dehydratase is similar to: | PaperBLAST |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 99% id, 100% cov |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 64% id, 100% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 51% id, 100% cov |
| H281DRAFT_02329: dihydroxyacid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 66% id, 100% cov |
| H281DRAFT_03422: dihydroxyacid dehydratase (EC 4.2.1.9) is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 50% id, 98% cov |
| H281DRAFT_06137: dihydroxyacid dehydratase (EC 4.2.1.9) is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 45% id, 97% cov |
| H281DRAFT_05919: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 44% id, 99% cov |
| H281DRAFT_00127: dihydroxyacid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 37% id, 96% cov |
| H281DRAFT_01518: D-mannonate dehydratase (EC 4.2.1.8) is similar to: | PaperBLAST |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 33% id, 100% cov |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 31% id, 96% cov |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 31% id, 56% cov |
| H281DRAFT_00974: L-alanine-DL-glutamate epimerase is similar to: | PaperBLAST |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 34% id, 94% cov |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 34% id, 90% cov |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 31% id, 97% cov |
| H281DRAFT_06497: L-alanine-DL-glutamate epimerase is similar to: | PaperBLAST |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 30% id, 96% cov |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 29% id, 85% cov |
GAD_PICTO / Q6L1T2: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Picrophilus torridus | 26% id, 93% cov |
| H281DRAFT_01228: L-rhamnonate dehydratase is similar to: | PaperBLAST |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 28% id, 91% cov |
GAD_PICTO / Q6L1T2: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Picrophilus torridus | 26% id, 85% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 32% id, 70% cov |
| H281DRAFT_05472: L-alanine-DL-glutamate epimerase is similar to: | PaperBLAST |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 27% id, 91% cov |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 26% id, 93% cov |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 28% id, 79% cov |
| H281DRAFT_01072: muconate cycloisomerase (EC 5.5.1.1) is similar to: | PaperBLAST |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 27% id, 86% cov |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 26% id, 88% cov |
| H281DRAFT_01645: muconate cycloisomerase (EC 5.5.1.1) is similar to: | PaperBLAST |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 25% id, 91% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 23% id, 90% cov |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 20% id, 93% cov |
| H281DRAFT_01717: L-alanine-DL-glutamate epimerase is similar to: | PaperBLAST |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 26% id, 85% cov |
| H281DRAFT_05312: dihydroxyacid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 32% id, 56% cov |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 30% id, 51% cov |
| H281DRAFT_03815: D-glucarate dehydratase is similar to: | PaperBLAST |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 23% id, 72% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 15 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory