Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)
Found 11 curated entries in PaperBLAST's database that match '4.2.1.90' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 11 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query
| H281DRAFT_03532: altronate hydrolase is similar to: | PaperBLAST |
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 92% id, 100% cov |
| H281DRAFT_03533: SAF domain-containing protein is similar to: | PaperBLAST |
BPHYT_RS34235: putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 86% id, 100% cov |
| H281DRAFT_01228: L-rhamnonate dehydratase is similar to: | PaperBLAST |
RHMD_POLSJ / Q12DF1: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Polaromonas sp. | 86% id, 99% cov |
lra3 / Q1NEI8: L-rhamnonate dehydratase (EC 4.2.1.90) from Sphingomonas sp. | 79% id, 99% cov |
RHMD_ECOLI / P77215: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Escherichia coli | 62% id, 100% cov |
| H281DRAFT_00666: altronate hydrolase is similar to: | PaperBLAST |
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 35% id, 92% cov |
| H281DRAFT_05320: galactarate dehydratase is similar to: | PaperBLAST |
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 30% id, 88% cov |
| H281DRAFT_06497: L-alanine-DL-glutamate epimerase is similar to: | PaperBLAST |
RHMD_POLSJ / Q12DF1: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Polaromonas sp. | 29% id, 82% cov |
| H281DRAFT_05472: L-alanine-DL-glutamate epimerase is similar to: | PaperBLAST |
RHMD_POLSJ / Q12DF1: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Polaromonas sp. | 29% id, 82% cov |
| H281DRAFT_00974: L-alanine-DL-glutamate epimerase is similar to: | PaperBLAST |
lra3 / Q1NEI8: L-rhamnonate dehydratase (EC 4.2.1.90) from Sphingomonas sp. | 26% id, 84% cov |
RHMD_POLSJ / Q12DF1: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Polaromonas sp. | 25% id, 85% cov |
A3LZU6: L-rhamnonate dehydratase (EC 4.2.1.90) from Scheffersomyces stipitis | 28% id, 76% cov |
| H281DRAFT_04215: galactonate dehydratase is similar to: | PaperBLAST |
A3LZU6: L-rhamnonate dehydratase (EC 4.2.1.90) from Scheffersomyces stipitis | 27% id, 76% cov |
lra3 / Q1NEI8: L-rhamnonate dehydratase (EC 4.2.1.90) from Sphingomonas sp. | 31% id, 65% cov |
RHMD_POLSJ / Q12DF1: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Polaromonas sp. | 31% id, 65% cov |
| H281DRAFT_01518: D-mannonate dehydratase (EC 4.2.1.8) is similar to: | PaperBLAST |
lra3 / Q1NEI8: L-rhamnonate dehydratase (EC 4.2.1.90) from Sphingomonas sp. | 39% id, 28% cov |
A3LZU6: L-rhamnonate dehydratase (EC 4.2.1.90) from Scheffersomyces stipitis | 31% id, 31% cov |
RHMD_POLSJ / Q12DF1: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Polaromonas sp. | 32% id, 28% cov |
| H281DRAFT_00429: L-fuconate dehydratase is similar to: | PaperBLAST |
A3LZU6: L-rhamnonate dehydratase (EC 4.2.1.90) from Scheffersomyces stipitis | 28% id, 32% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 11 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory