Curated BLAST
Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)
Found 23 curated entries in PaperBLAST's database that match '4.3.1.3' as complete word(s).
These curated entries have 20 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query
H281DRAFT_04873: histidine ammonia-lyase
is similar to: | PaperBLAST |
BPHYT_RS07555: Histidine ammonia-lyase (EC 4.3.1.3) from Burkholderia phytofirmans | 97% id,
100% cov |
HUTH_PSEPU / P21310: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Pseudomonas putida
hutH / P21310: histidase subunit (EC 4.3.1.3) from Pseudomonas putida | 64% id,
98% cov |
PfGW456L13_320: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens | 63% id,
99% cov |
Pf6N2E2_3799: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens | 63% id,
98% cov |
BWI76_RS08740: Histidine ammonia-lyase (EC 4.3.1.3) from Klebsiella michiganensis | 62% id,
99% cov |
Ga0059261_3963: Histidine ammonia-lyase (EC 4.3.1.3) from Sphingomonas koreensis | 59% id,
99% cov |
Ac3H11_2558: Histidine ammonia-lyase (EC 4.3.1.3) from Acidovorax sp. | 59% id,
96% cov |
SM_b21165: Histidine ammonia-lyase (EC 4.3.1.3) from Sinorhizobium meliloti | 57% id,
97% cov |
PGA1_c36340: Histidine ammonia-lyase (EC 4.3.1.3) from Phaeobacter inhibens | 52% id,
99% cov |
Sama_1631: Histidine ammonia-lyase (EC 4.3.1.3) from Shewanella amazonensis | 44% id,
97% cov |
CA265_RS22270: Histidine ammonia-lyase (EC 4.3.1.3) from Pedobacter sp. | 44% id,
96% cov |
AO356_09605: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens | 41% id,
94% cov |
Pf1N1B4_1582: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens | 41% id,
93% cov |
HUTH_DICDI / Q54JI7: Probable histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Dictyostelium discoideum | 42% id,
90% cov |
Q6AZU6: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus tropicalis | 45% id,
76% cov |
HUTH_HUMAN / P42357: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Homo sapiens
HAL / P42357: histidase subunit (EC 4.3.1.3) from Homo sapiens
P42357: histidine ammonia-lyase (EC 4.3.1.3) from Homo sapiens | 45% id,
75% cov |
HUTH_RAT / P21213: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Rattus norvegicus | 45% id,
75% cov |
F6RBJ7: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus tropicalis | 45% id,
73% cov |
Q0VGW8: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus laevis | 45% id,
73% cov |
HUTH1_CAEEL / Q20502: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Caenorhabditis elegans | 42% id,
74% cov |
More... |
H281DRAFT_05294: histidine ammonia-lyase
is similar to: | PaperBLAST |
AO356_09605: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens | 52% id,
96% cov |
Pf1N1B4_1582: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens | 51% id,
97% cov |
HUTH_PSEPU / P21310: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Pseudomonas putida
hutH / P21310: histidase subunit (EC 4.3.1.3) from Pseudomonas putida | 37% id,
97% cov |
BPHYT_RS07555: Histidine ammonia-lyase (EC 4.3.1.3) from Burkholderia phytofirmans | 39% id,
93% cov |
Ac3H11_2558: Histidine ammonia-lyase (EC 4.3.1.3) from Acidovorax sp. | 38% id,
95% cov |
Ga0059261_3963: Histidine ammonia-lyase (EC 4.3.1.3) from Sphingomonas koreensis | 37% id,
97% cov |
Sama_1631: Histidine ammonia-lyase (EC 4.3.1.3) from Shewanella amazonensis | 36% id,
96% cov |
SM_b21165: Histidine ammonia-lyase (EC 4.3.1.3) from Sinorhizobium meliloti | 37% id,
93% cov |
PfGW456L13_320: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens | 37% id,
93% cov |
Pf6N2E2_3799: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens | 37% id,
92% cov |
BWI76_RS08740: Histidine ammonia-lyase (EC 4.3.1.3) from Klebsiella michiganensis | 36% id,
94% cov |
PGA1_c36340: Histidine ammonia-lyase (EC 4.3.1.3) from Phaeobacter inhibens | 35% id,
94% cov |
CA265_RS22270: Histidine ammonia-lyase (EC 4.3.1.3) from Pedobacter sp. | 35% id,
91% cov |
HUTH_DICDI / Q54JI7: Probable histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Dictyostelium discoideum | 34% id,
92% cov |
F6RBJ7: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus tropicalis | 36% id,
78% cov |
Q0VGW8: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus laevis | 35% id,
78% cov |
Q6AZU6: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus tropicalis | 35% id,
78% cov |
HUTH_RAT / P21213: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Rattus norvegicus | 35% id,
75% cov |
HUTH_HUMAN / P42357: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Homo sapiens
HAL / P42357: histidase subunit (EC 4.3.1.3) from Homo sapiens
P42357: histidine ammonia-lyase (EC 4.3.1.3) from Homo sapiens | 36% id,
72% cov |
HUTH1_CAEEL / Q20502: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Caenorhabditis elegans | 37% id,
70% cov |
More... |
H281DRAFT_03978: histidine ammonia-lyase
is similar to: | PaperBLAST |
Ga0059261_3963: Histidine ammonia-lyase (EC 4.3.1.3) from Sphingomonas koreensis | 37% id,
96% cov |
BPHYT_RS07555: Histidine ammonia-lyase (EC 4.3.1.3) from Burkholderia phytofirmans | 36% id,
96% cov |
SM_b21165: Histidine ammonia-lyase (EC 4.3.1.3) from Sinorhizobium meliloti | 34% id,
99% cov |
Ac3H11_2558: Histidine ammonia-lyase (EC 4.3.1.3) from Acidovorax sp. | 35% id,
96% cov |
BWI76_RS08740: Histidine ammonia-lyase (EC 4.3.1.3) from Klebsiella michiganensis | 34% id,
97% cov |
Pf6N2E2_3799: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens | 33% id,
95% cov |
HUTH_PSEPU / P21310: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Pseudomonas putida
hutH / P21310: histidase subunit (EC 4.3.1.3) from Pseudomonas putida | 32% id,
96% cov |
PfGW456L13_320: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens | 33% id,
93% cov |
HUTH_DICDI / Q54JI7: Probable histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Dictyostelium discoideum | 31% id,
95% cov |
PGA1_c36340: Histidine ammonia-lyase (EC 4.3.1.3) from Phaeobacter inhibens | 32% id,
92% cov |
Sama_1631: Histidine ammonia-lyase (EC 4.3.1.3) from Shewanella amazonensis | 31% id,
90% cov |
CA265_RS22270: Histidine ammonia-lyase (EC 4.3.1.3) from Pedobacter sp. | 31% id,
81% cov |
HUTH_HUMAN / P42357: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Homo sapiens
HAL / P42357: histidase subunit (EC 4.3.1.3) from Homo sapiens
P42357: histidine ammonia-lyase (EC 4.3.1.3) from Homo sapiens | 32% id,
78% cov |
HUTH1_CAEEL / Q20502: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Caenorhabditis elegans | 33% id,
73% cov |
HUTH_RAT / P21213: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Rattus norvegicus | 33% id,
74% cov |
F6RBJ7: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus tropicalis | 31% id,
77% cov |
Q0VGW8: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus laevis | 31% id,
77% cov |
Q6AZU6: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus tropicalis | 31% id,
76% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory