Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 11 curated entries in PaperBLAST's database that match '5.1.99.1' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_06614: Catechol 2,3-dioxygenase
is similar to:
PaperBLAST

Msed_0639 / A4YEG2: methylmalonyl-CoA epimerase monomer (EC 5.1.99.1) from Metallosphaera sedula
A4YEG2: methylmalonyl-CoA epimerase (EC 5.1.99.1) from Metallosphaera sedula

30% id,
98% cov

K7SKA8: methylmalonyl-CoA epimerase (EC 5.1.99.1) from Acidipropionibacterium acidipropionici

23% id,
88% cov

H281DRAFT_04643: methylmalonyl-CoA epimerase
is similar to:
PaperBLAST

Msed_0639 / A4YEG2: methylmalonyl-CoA epimerase monomer (EC 5.1.99.1) from Metallosphaera sedula
A4YEG2: methylmalonyl-CoA epimerase (EC 5.1.99.1) from Metallosphaera sedula

31% id,
94% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory