Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 17 curated entries in PaperBLAST's database that match '5.3.1.7' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_02117: Mannose or cellobiose epimerase, N-acyl-D-glucosamine 2-epimerase family
is similar to:
PaperBLAST

BPHYT_RS02050: D-mannose isomerase (EC 5.3.1.7) from Burkholderia phytofirmans

92% id,
100% cov

MANI_MARM1 / F2JVT6: D-mannose isomerase; MI; EC 5.3.1.7 from Marinomonas mediterranea

56% id,
98% cov

Ac3H11_2078: D-mannose isomerase (EC 5.3.1.7) from Acidovorax sp.

57% id,
96% cov

More...

H281DRAFT_03523: mannose-6-phosphate isomerase
is similar to:
PaperBLAST

Ac3H11_2078: D-mannose isomerase (EC 5.3.1.7) from Acidovorax sp.

26% id,
64% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory