Curated BLAST for Genomes


Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 12 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_01655: 4-oxalocrotonate tautomerase family enzyme
is similar to:

P49172: 2-hydroxymuconate tautomerase (EC from Pseudomonas sp.

39% id,
89% cov

4OT1_PSEPU / Q01468: 2-hydroxymuconate tautomerase; 4-oxalocrotonate tautomerase; 4-OT; EC from Pseudomonas putida
xylH / Q01468: 4-oxalocrotonate tautomerase subunit (EC from Pseudomonas putida
Q01468: 2-hydroxymuconate tautomerase (EC from Pseudomonas putida

36% id,
94% cov

cnbG / Q38M36: 2-hydroxymuconate tautomerase (EC from Comamonas testosteroni

29% id,
100% cov


H281DRAFT_05328: 4-oxalocrotonate tautomerase
is similar to:

A2SL37: 2-hydroxymuconate tautomerase (EC from Methylibium petroleiphilum

41% id,
79% cov

4OT_BACSU / P70994: 2-hydroxymuconate tautomerase; (2Z,4E)-2-hydroxyhexa-2,4-dienedioate keto-enol isomerase; 4-oxalocrotonate tautomerase; 4-OT; EC from Bacillus subtilis

32% id,
97% cov

O29588: 2-hydroxymuconate tautomerase (EC from Archaeoglobus fulgidus

33% id,
76% cov


H281DRAFT_01662: 4-oxalocrotonate tautomerase
is similar to:

A9W9U6: 2-hydroxymuconate tautomerase (EC from Chloroflexus aurantiacus

31% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory