Curated BLAST for Genomes


Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 50 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 34 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_00078: phosphomannomutase
is similar to:

ALGC_PSEAE / P26276: Phosphomannomutase/phosphoglucomutase; PMM / PGM; EC; EC from Pseudomonas aeruginosa
algC / P26276: phosphomannomutase (EC; EC from Pseudomonas aeruginosa

54% id,
98% cov

M1T754: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC; phosphomannomutase (EC from Sphingomonas sanxanigenens

43% id,
94% cov

Q8PGN7: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC from Xanthomonas citri

35% id,
97% cov


H281DRAFT_04410: phosphoglucosamine mutase
is similar to:

PGMMM_THEKO / Q68BJ6: Phosphoglucomutase/phosphomannomutase; PGM/PMM; EC; EC from Thermococcus kodakarensis

33% id,
97% cov

Q8PGN7: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC from Xanthomonas citri

31% id,
95% cov

Q980S1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC; phosphomannomutase (EC from Saccharolobus solfataricus

28% id,
99% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory