Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)
Found 3 curated entries in PaperBLAST's database that match '5.5.1.27' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query
| H281DRAFT_04215: galactonate dehydratase is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 32% id, 99% cov |
| H281DRAFT_06497: L-alanine-DL-glutamate epimerase is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 33% id, 91% cov |
| H281DRAFT_00974: L-alanine-DL-glutamate epimerase is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 31% id, 98% cov |
| H281DRAFT_01228: L-rhamnonate dehydratase is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 31% id, 96% cov |
| H281DRAFT_05472: L-alanine-DL-glutamate epimerase is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 26% id, 97% cov |
| H281DRAFT_03815: D-glucarate dehydratase is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 26% id, 90% cov |
| H281DRAFT_01518: D-mannonate dehydratase (EC 4.2.1.8) is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 31% id, 48% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory