Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 1 curated entries in PaperBLAST's database that match 'deoxy%ribose dehydrogenase%beta' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_01475: isoquinoline 1-oxidoreductase, beta subunit
is similar to:
PaperBLAST

C7A11_18885 / A0A1N7UDX6: 2-deoxy-D-ribose dehydrogenase β subunit from Pseudomonas simiae

37% id,
99% cov

H281DRAFT_05400: isoquinoline 1-oxidoreductase, beta subunit
is similar to:
PaperBLAST

C7A11_18885 / A0A1N7UDX6: 2-deoxy-D-ribose dehydrogenase β subunit from Pseudomonas simiae

35% id,
98% cov

H281DRAFT_03880: isoquinoline 1-oxidoreductase, beta subunit
is similar to:
PaperBLAST

C7A11_18885 / A0A1N7UDX6: 2-deoxy-D-ribose dehydrogenase β subunit from Pseudomonas simiae

38% id,
85% cov

H281DRAFT_01582: nicotinate dehydrogenase subunit B
is similar to:
PaperBLAST

C7A11_18885 / A0A1N7UDX6: 2-deoxy-D-ribose dehydrogenase β subunit from Pseudomonas simiae

30% id,
94% cov

H281DRAFT_02814: xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC 1.17.1.4)
is similar to:
PaperBLAST

C7A11_18885 / A0A1N7UDX6: 2-deoxy-D-ribose dehydrogenase β subunit from Pseudomonas simiae

31% id,
23% cov

H281DRAFT_01141: xanthine dehydrogenase, molybdenum binding subunit apoprotein
is similar to:
PaperBLAST

C7A11_18885 / A0A1N7UDX6: 2-deoxy-D-ribose dehydrogenase β subunit from Pseudomonas simiae

29% id,
20% cov

H281DRAFT_05975: carbon-monoxide dehydrogenase large subunit
is similar to:
PaperBLAST

C7A11_18885 / A0A1N7UDX6: 2-deoxy-D-ribose dehydrogenase β subunit from Pseudomonas simiae

33% id,
17% cov

H281DRAFT_03032: xanthine dehydrogenase, molybdenum binding subunit apoprotein
is similar to:
PaperBLAST

C7A11_18885 / A0A1N7UDX6: 2-deoxy-D-ribose dehydrogenase β subunit from Pseudomonas simiae

26% id,
21% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory