Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 3 curated entries in PaperBLAST's database that match 'sorbitol-6-phosphate dehydrogenase' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 41 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_03703: NADP-dependent 3-hydroxy acid dehydrogenase YdfG
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

35% id,
99% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

32% id,
99% cov

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

30% id,
97% cov

H281DRAFT_04160: D-sorbitol dehydrogenase (acceptor)
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

36% id,
97% cov

H281DRAFT_02581: 3-oxoacyl-[acyl-carrier protein] reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

34% id,
96% cov

H281DRAFT_00677: 3-oxoacyl-[acyl-carrier protein] reductase
is similar to:
PaperBLAST

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

32% id,
98% cov

H281DRAFT_00643: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

32% id,
98% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

31% id,
99% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

31% id,
99% cov

H281DRAFT_06506: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

32% id,
96% cov

H281DRAFT_06377: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

32% id,
96% cov

H281DRAFT_03856: 3-oxoacyl-[acyl-carrier protein] reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

31% id,
97% cov

H281DRAFT_01792: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

31% id,
99% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

29% id,
98% cov

H281DRAFT_00212: 3-oxoacyl-[acyl-carrier protein] reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

31% id,
97% cov

H281DRAFT_01159: 2-deoxy-D-gluconate 3-dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

31% id,
98% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

29% id,
98% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

28% id,
98% cov

H281DRAFT_01227: L-rhamnose 1-dehydrogenase
is similar to:
PaperBLAST

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

30% id,
98% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

27% id,
98% cov

H281DRAFT_04910: 3-oxoacyl-[acyl-carrier protein] reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

31% id,
95% cov

H281DRAFT_06507: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

30% id,
98% cov

H281DRAFT_01131: 3-oxoacyl-[acyl-carrier protein] reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

30% id,
97% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

27% id,
98% cov

H281DRAFT_04145: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
98% cov

H281DRAFT_02429: 3-oxoacyl-[acyl-carrier protein] reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

30% id,
96% cov

H281DRAFT_03748: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
97% cov

H281DRAFT_05552: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
97% cov

H281DRAFT_02507: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
96% cov

H281DRAFT_01019: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

28% id,
98% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

27% id,
98% cov

H281DRAFT_03637: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

28% id,
97% cov

H281DRAFT_06296: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

28% id,
97% cov

H281DRAFT_04976: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

28% id,
97% cov

H281DRAFT_06109: 3-oxoacyl-[acyl-carrier protein] reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

27% id,
100% cov

H281DRAFT_01188: 3-oxoacyl-[acyl-carrier protein] reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

27% id,
97% cov

H281DRAFT_06131: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

34% id,
76% cov

H281DRAFT_05863: 3-oxoacyl-[acyl-carrier protein] reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

27% id,
96% cov

H281DRAFT_04492: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

27% id,
95% cov

H281DRAFT_03641: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

26% id,
98% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

26% id,
98% cov

H281DRAFT_04541: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

27% id,
95% cov

H281DRAFT_01230: 3-oxoacyl-[acyl-carrier protein] reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

26% id,
98% cov

H281DRAFT_01184: 3-oxoacyl-[acyl-carrier protein] reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

26% id,
97% cov

H281DRAFT_04114: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

33% id,
76% cov

H281DRAFT_03042: NADP-dependent 3-hydroxy acid dehydrogenase YdfG
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

28% id,
89% cov

H281DRAFT_05525: Short-chain dehydrogenases of various substrate specificities
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

28% id,
72% cov

H281DRAFT_02510: Short-chain dehydrogenase
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

29% id,
68% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

32% id,
42% cov

H281DRAFT_02082: Short-chain dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
68% cov

H281DRAFT_06578: NADP-dependent 3-hydroxy acid dehydrogenase YdfG
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

27% id,
71% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

27% id,
71% cov

H281DRAFT_03722: hypothetical protein
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
67% cov

H281DRAFT_00662: Short-chain dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

28% id,
68% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 39 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory