Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 25 curated entries in PaperBLAST's database that match 'sucrose hydrolase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_02777: alpha-glucosidase
is similar to:
PaperBLAST

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

38% id,
98% cov

AAM42629.1: sucrose hydrolase (SuxB;XCC3359) (EC 3.2.1.-)

26% id,
52% cov

AAM38333.1: sucrose hydrolase (XAC3490) (EC 3.2.1.-)

27% id,
45% cov

More...

H281DRAFT_02776: maltose alpha-D-glucosyltransferase/ alpha-amylase
is similar to:
PaperBLAST

3czkA / Q6UVM5: Crystal structure analysis of sucrose hydrolase(suh) e322q-sucrose complex

31% id,
54% cov

AAQ93678.1: sucrose hydrolase (Suh) (EC 3.2.1.-)

31% id,
52% cov

AAM38333.1: sucrose hydrolase (XAC3490) (EC 3.2.1.-)

31% id,
52% cov

More...

H281DRAFT_06049: trehalose synthase
is similar to:
PaperBLAST

AAM42629.1: sucrose hydrolase (SuxB;XCC3359) (EC 3.2.1.-)

31% id,
52% cov

3czkA / Q6UVM5: Crystal structure analysis of sucrose hydrolase(suh) e322q-sucrose complex

29% id,
50% cov

AAM38333.1: sucrose hydrolase (XAC3490) (EC 3.2.1.-)

30% id,
48% cov

More...

H281DRAFT_06050: 1,4-alpha-glucan branching enzyme
is similar to:
PaperBLAST

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

27% id,
21% cov

H281DRAFT_01854: isoamylase
is similar to:
PaperBLAST

3czkA / Q6UVM5: Crystal structure analysis of sucrose hydrolase(suh) e322q-sucrose complex

28% id,
18% cov

AAM38333.1: sucrose hydrolase (XAC3490) (EC 3.2.1.-)

27% id,
18% cov

AAQ93678.1: sucrose hydrolase (Suh) (EC 3.2.1.-)

28% id,
17% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory