Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 24 curated entries in PaperBLAST's database that match '1.1.1.17' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_01554: D-mannonate oxidoreductase
is similar to:
PaperBLAST

MTLD_ECOLI / P09424: Mannitol-1-phosphate 5-dehydrogenase; EC 1.1.1.17 from Escherichia coli
MtlD / b3600: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Escherichia coli
mtlD / P09424: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Escherichia coli
P09424: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Escherichia coli

27% id,
82% cov

CCNA_02181: phosphatase/phosphohexomutase family protein
is similar to:
PaperBLAST

Q6FBP5: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baylyi

32% id,
29% cov

D0C7J2: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baumannii

29% id,
30% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory