Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 19 curated entries in PaperBLAST's database that match '1.1.1.18' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_01354: myo-inositol 2-dehydrogenase IdhA
is similar to:
PaperBLAST

HSERO_RS12095: Myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Herbaspirillum seropedicae

52% id,
99% cov

Q9EZV8: inositol 2-dehydrogenase (EC 1.1.1.18) from Sinorhizobium fredii

48% id,
95% cov

MI2D_RHIME / O68965: Inositol 2-dehydrogenase; Myo-inositol 2-dehydrogenase; MI-dehydrogenase; EC 1.1.1.18 from Rhizobium meliloti
SM_b20899: Inositol 2-dehydrogenase (EC 1.1.1.18) from Sinorhizobium meliloti
O68965: inositol 2-dehydrogenase (EC 1.1.1.18) from Sinorhizobium meliloti

47% id,
95% cov

More...

CCNA_01702: NAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus

27% id,
96% cov

CCNA_01283: NADP-dependent aldose oxidoreductase
is similar to:
PaperBLAST

Q9EZV8: inositol 2-dehydrogenase (EC 1.1.1.18) from Sinorhizobium fredii

25% id,
91% cov

E1U888: inositol 2-dehydrogenase (EC 1.1.1.18) from Lacticaseibacillus casei

24% id,
96% cov

IOLG_THEMA / Q9WYP5: Myo-inositol 2-dehydrogenase; EC 1.1.1.18 from Thermotoga maritima
iolG / Q9WYP5: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Thermotoga maritima

29% id,
74% cov

More...

CCNA_02094: MviM-like NAD-dependent oxidoreductase
is similar to:
PaperBLAST

iolG / A0A0H3FQ94: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Klebsiella aerogenes

33% id,
60% cov

BWI76_RS03095: Inositol 2-dehydrogenase (EC 1.1.1.18) from Klebsiella michiganensis

31% id,
60% cov

AO353_21365: Inositol 2-dehydrogenase (EC 1.1.1.18) from Pseudomonas fluorescens

31% id,
57% cov

More...

CCNA_01018: D-galactose 1-dehydrogenase
is similar to:
PaperBLAST

Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus

30% id,
44% cov

E1U888: inositol 2-dehydrogenase (EC 1.1.1.18) from Lacticaseibacillus casei

27% id,
42% cov

PS417_11875: Inositol 2-dehydrogenase (EC 1.1.1.18) from Pseudomonas simiae

28% id,
30% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory