Searching in Caulobacter crescentus NA1000 (Caulo)
Found 50 curated entries in PaperBLAST's database that match '1.1.1.25' as complete word(s).
These curated entries have 36 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Caulobacter crescentus NA1000, or try another query
| CCNA_00003: shikimate 5-dehydrogenase is similar to: | PaperBLAST |
CCNA_00003: shikimate dehydrogenase (EC 1.1.1.25) from Caulobacter crescentus | 100% id, 100% cov |
A0A1K3RIC7: shikimate dehydrogenase (EC 1.1.1.25) from Mycobacterium tuberculosis | 39% id, 96% cov |
AROE_VIBCH / Q9KVT3: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Vibrio cholerae | 38% id, 97% cov |
| CCNA_01645: 3-hydroxyisobutyrate dehydrogenase is similar to: | PaperBLAST |
AROE_THET8 / Q5SJF8: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Thermus thermophilus | 33% id, 41% cov |
| CCNA_03104: 3-dehydroquinate synthase is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 39% id, 21% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 31% id, 11% cov |
Q6W3D0: shikimate dehydrogenase (EC 1.1.1.25) from Toxoplasma gondii | 40% id, 4% cov |
| CCNA_03642: succinate dehydrogenase flavoprotein subunit is similar to: | PaperBLAST |
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana | 28% id, 16% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory