Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 76 curated entries in PaperBLAST's database that match '1.1.1.27' as complete word(s).

These curated entries have 63 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_03770: malate dehydrogenase is similar to:	PaperBLAST
Q8I8U5: L-lactate dehydrogenase (EC 1.1.1.27) from Eimeria acervulina	51% id, 98% cov
Q27797: L-lactate dehydrogenase (EC 1.1.1.27) from Toxoplasma gondii	51% id, 98% cov
Q8I8U4: L-lactate dehydrogenase (EC 1.1.1.27) from Eimeria tenella	48% id, 98% cov
Q9GT92: L-lactate dehydrogenase (EC 1.1.1.27) from Cryptosporidium parvum	48% id, 98% cov
CH_024078: L-lactate dehydrogenase; EC 1.1.1.27 from Babesia bovis Q7Z0X7: L-lactate dehydrogenase (EC 1.1.1.27) from Babesia bovis	48% id, 95% cov
LDH: lactate dehydrogenase; EC 1.1.1.27 from Plasmodium falciparum LDH / GB\|ABA46354.1: lactate dehydrogenase; EC 1.1.1.27 from Plasmodium falciparum	46% id, 98% cov
P90613: L-lactate dehydrogenase (EC 1.1.1.27) from Toxoplasma gondii	46% id, 98% cov
Q8I8U3: L-lactate dehydrogenase (EC 1.1.1.27) from Eimeria maxima	45% id, 97% cov
LDH_PLABA / Q7SI97: L-lactate dehydrogenase; EC 1.1.1.27 from Plasmodium berghei	44% id, 96% cov
Q5FMB0: L-lactate dehydrogenase (EC 1.1.1.27) from Lactobacillus acidophilus	34% id, 99% cov
A0A1A6GB48: L-lactate dehydrogenase (EC 1.1.1.27) from Enterococcus mundtii	34% id, 97% cov
LDH_BACSU / P13714: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Bacillus subtilis	35% id, 95% cov
LDH_THEMA / P16115: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Thermotoga maritima	34% id, 98% cov
ldhA: L-lactate dehydrogenase 1; EC 1.1.1.27 from Lactococcus lactis	34% id, 95% cov
LDH1_STAAC / Q5HJD7: L-lactate dehydrogenase 1; L-LDH 1; EC 1.1.1.27 from Staphylococcus aureus LDH1_STAAE / A6QDL6: L-lactate dehydrogenase 1; L-LDH 1; EC 1.1.1.27 from Staphylococcus aureus	33% id, 97% cov
LDH_LACCA / P00343: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Lacticaseibacillus casei ldh / P00343: L-lactate dehydrogenase subunit (EC 1.1.1.27) from Lactobacillus casei	34% id, 93% cov
A0A2U9AUU1: L-lactate dehydrogenase (EC 1.1.1.27) from Lacticaseibacillus casei	34% id, 92% cov
B1A4R6: L-lactate dehydrogenase (EC 1.1.1.27) from Thermoanaerobacter ethanolicus	32% id, 98% cov
W8CXQ9: L-lactate dehydrogenase (EC 1.1.1.27) from Weizmannia coagulans	32% id, 97% cov
LDH_THET8 / Q5SJA1: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Thermus thermophilus	31% id, 99% cov
LDH2_BIFL2 / E8ME30: L-lactate dehydrogenase 2; L-LDH 2; FBP-dependent LDH; EC 1.1.1.27 from Bifidobacterium longum ldh2 / E8ME30: L-lactate dehydrogenase subunit (EC 1.1.1.27) from Bifidobacterium longum	33% id, 95% cov
LDH_GEOSE / P00344: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Geobacillus stearothermophilus	32% id, 96% cov
LDH_PEDAC / Q59645: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Pediococcus acidilactici	33% id, 93% cov
LDH_LACHE / O32765: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Lactobacillus helveticus	32% id, 96% cov
LDH_THECA / P06150: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Thermus caldophilus	31% id, 99% cov
LDH_STRP2 / Q04K99: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Streptococcus pneumoniae LDH_STRPN / P0A3M9: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Streptococcus pneumoniae	32% id, 95% cov
Q8CMZ0: L-lactate dehydrogenase (EC 1.1.1.27) from Staphylococcus epidermidis	31% id, 98% cov
ldh / P26283: L-lactate dehydrogenase subunit (EC 1.1.1.27) from Streptococcus mutans P26283: L-lactate dehydrogenase (EC 1.1.1.27) from Streptococcus mutans	32% id, 93% cov
B9MKZ8: L-lactate dehydrogenase (EC 1.1.1.27) from Caldicellulosiruptor bescii	31% id, 98% cov
P59390: L-lactate dehydrogenase (EC 1.1.1.27) from Lactiplantibacillus plantarum	32% id, 93% cov
LDH_SELRU / Q9EVR0: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Selenomonas ruminantium	30% id, 98% cov
E7CXT1: L-lactate dehydrogenase (EC 1.1.1.27) from Thermoanaerobacterium saccharolyticum	30% id, 99% cov
LDH2_STAAC / Q5HCV0: L-lactate dehydrogenase 2; L-LDH 2; EC 1.1.1.27 from Staphylococcus aureus LDH2_STAAE / A6QK89: L-lactate dehydrogenase 2; L-LDH 2; EC 1.1.1.27 from Staphylococcus aureus	30% id, 97% cov
LDH_LACPE / P56511: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Lactiplantibacillus pentosus ldh: L-lactate dehydrogenase; EC 1.1.1.27 from Lactobacillus pentosus	31% id, 95% cov
ldh1: L-lactate dehydrogenase 1; EC 1.1.1.27 from Lactobacillus plantarum	30% id, 95% cov
P07864: L-lactate dehydrogenase (EC 1.1.1.27) from Homo sapiens	31% id, 93% cov
LDHB_PIG / P00336: L-lactate dehydrogenase B chain; LDH-B; LDH heart subunit; LDH-H; EC 1.1.1.27 from Sus scrofa P00336: L-lactate dehydrogenase (EC 1.1.1.27) from Sus scrofa	30% id, 93% cov
LDHA_RABIT / P13491: L-lactate dehydrogenase A chain; LDH-A; LDH muscle subunit; LDH-M; EC 1.1.1.27 from Oryctolagus cuniculus P13491: L-lactate dehydrogenase (EC 1.1.1.27) from Oryctolagus cuniculus	30% id, 92% cov
LDH_LACLN / D8KFT1: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Lactococcus lactis	29% id, 98% cov
LDHA_PIG / P00339: L-lactate dehydrogenase A chain; LDH-A; LDH muscle subunit; LDH-M; EC 1.1.1.27 from Sus scrofa P00339: L-lactate dehydrogenase (EC 1.1.1.27) from Sus scrofa	30% id, 92% cov
LDH6A_HUMAN / Q6ZMR3: L-lactate dehydrogenase A-like 6A; LDHA-like protein 6A; EC 1.1.1.27 from Homo sapiens	30% id, 93% cov
LDHB_HUMAN / P07195: L-lactate dehydrogenase B chain; LDH-B; LDH heart subunit; LDH-H; Renal carcinoma antigen NY-REN-46; EC 1.1.1.27 from Homo sapiens	30% id, 93% cov
P00345: L-lactate dehydrogenase (EC 1.1.1.27) from Priestia megaterium	30% id, 94% cov
LDHA_MOUSE / P06151: L-lactate dehydrogenase A chain; LDH-A; LDH muscle subunit; LDH-M; EC 1.1.1.27 from Mus musculus	30% id, 92% cov
Ldha / P04642: lactate dehydrogenase subunit (EC 1.1.1.27) from Rattus norvegicus	30% id, 92% cov
Q5E9B1: L-lactate dehydrogenase (EC 1.1.1.27) from Bos taurus	30% id, 93% cov
B7XH73: L-lactate dehydrogenase (EC 1.1.1.27) from Equus caballus	29% id, 92% cov
LDHA_HUMAN / P00338: L-lactate dehydrogenase A chain; LDH-A; Cell proliferation-inducing gene 19 protein; LDH muscle subunit; LDH-M; Renal carcinoma antigen NY-REN-59; EC 1.1.1.27 from Homo sapiens P00338: L-lactate dehydrogenase (EC 1.1.1.27) from Homo sapiens	29% id, 92% cov
More...

CCNA_01462: lactate 2-monooxygenase is similar to:	PaperBLAST
Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans	30% id, 91% cov

CCNA_01209: L-lactate dehydrogenase is similar to:	PaperBLAST
Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans	31% id, 47% cov
Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans	42% id, 33% cov

CCNA_02357: methylmalonic acid semialdehyde dehydrogenase is similar to:	PaperBLAST
I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum	23% id, 47% cov

CCNA_01360: malonate-semialdehyde dehydrogenase IolA is similar to:	PaperBLAST
I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum	23% id, 46% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory