Curated BLAST
Searching in Caulobacter crescentus NA1000 (Caulo)
Found 27 curated entries in PaperBLAST's database that match '1.1.1.3' as complete word(s).
These curated entries have 23 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Caulobacter crescentus NA1000, or try another query
CCNA_01447: homoserine dehydrogenase
is similar to: | PaperBLAST |
Ga0059261_2711: homoserine dehydrogenase (EC 1.1.1.3) from Sphingomonas koreensis | 46% id,
98% cov |
DvMF_1412: homoserine dehydrogenase (EC 1.1.1.3) from Desulfovibrio vulgaris | 41% id,
97% cov |
DHOM_CORGL / P08499: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Corynebacterium glutamicum
P08499: homoserine dehydrogenase (EC 1.1.1.3) from Corynebacterium glutamicum | 39% id,
96% cov |
D8WXQ1: homoserine dehydrogenase (EC 1.1.1.3) from Bacillus methanolicus | 36% id,
99% cov |
Q56R01: homoserine dehydrogenase (EC 1.1.1.3) from Streptomyces clavuligerus | 36% id,
99% cov |
DHOM_BACSU / P19582: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Bacillus subtilis | 36% id,
98% cov |
P46806: homoserine dehydrogenase (EC 1.1.1.3) from Mycobacterium leprae | 36% id,
99% cov |
DHOM_LACLC / P52985: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Lactococcus lactis | 34% id,
99% cov |
A0A0H2WVX4: homoserine dehydrogenase (EC 1.1.1.3) from Staphylococcus aureus | 37% id,
79% cov |
D8WXQ2: homoserine dehydrogenase (EC 1.1.1.3) from Bacillus methanolicus | 37% id,
78% cov |
O58802: homoserine dehydrogenase (EC 1.1.1.3) from Pyrococcus horikoshii | 30% id,
97% cov |
CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp. | 28% id,
43% cov |
Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis | 30% id,
32% cov |
More... |
CCNA_00886: aspartokinase
is similar to: | PaperBLAST |
Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis | 31% id,
43% cov |
CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp. | 29% id,
44% cov |
O63067: homoserine dehydrogenase (EC 1.1.1.3) from Glycine max | 28% id,
45% cov |
ThrD / b0002: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli
thrA / P00561: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli | 30% id,
42% cov |
AKH2_ARATH / O81852: Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic; AK-HD 2; AK-HSDH 2; Beta-aspartyl phosphate homoserine 2; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana | 28% id,
44% cov |
BT2403: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Bacteroides thetaiotaomicron | 26% id,
48% cov |
AKH1_ARATH / Q9SA18: Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic; AK-HD 1; AK-HSDH 1; Beta-aspartyl phosphate homoserine 1; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana | 28% id,
43% cov |
More... |
CCNA_01998: uridylate kinase
is similar to: | PaperBLAST |
ThrD / b0002: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli
thrA / P00561: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli | 26% id,
20% cov |
AKH1_ARATH / Q9SA18: Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic; AK-HD 1; AK-HSDH 1; Beta-aspartyl phosphate homoserine 1; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana | 25% id,
18% cov |
CCNA_00316: glutamate 5-kinase
is similar to: | PaperBLAST |
ThrD / b0002: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli
thrA / P00561: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli | 29% id,
11% cov |
MetM / b3940: fused aspartate kinase/homoserine dehydrogenase 2 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli
metL / P00562: fused aspartate kinase/homoserine dehydrogenase 2 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli | 31% id,
10% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory