Searching in Caulobacter crescentus NA1000 (Caulo)
Found 4 curated entries in PaperBLAST's database that match '1.1.1.59'.
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Caulobacter crescentus NA1000, or try another query
| CCNA_01337: GMC family oxidoreductase is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 54% id, 96% cov |
| CCNA_00994: oxidoreductase, GMC family is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 43% id, 94% cov |
| CCNA_02725: choline dehydrogenase is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 41% id, 94% cov |
| CCNA_01416: 3-hydroxyisobutyrate dehydrogenase is similar to: | PaperBLAST |
HPD1 / A0A1D8PQ07: 3-hydroxypropanonate dehydrogenase (EC 1.1.1.59) from Candida albicans | 30% id, 95% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1450037-1451725 (frame +2) on NC_011916 is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 52% id, 100% cov |
Lawrence Berkeley National Laboratory