Curated BLAST for Genomes


Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 59 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 45 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_00193: 3-isopropylmalate dehydrogenase
is similar to:

P24404: 3-isopropylmalate dehydrogenase (EC from Agrobacterium tumefaciens

62% id,
98% cov

LEU3_ACIFR / Q56268: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC from Acidithiobacillus ferrooxidans
Q56268: 3-isopropylmalate dehydrogenase (EC from Acidithiobacillus ferrooxidans

53% id,
99% cov

Q00412: 3-isopropylmalate dehydrogenase (EC from Arthrospira platensis

53% id,
94% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory