Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 19 curated entries in PaperBLAST's database that match '1.1.99.6'.

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_03500: FAD/FMN-containing dehydrogenase
is similar to:
PaperBLAST

DLD_ARCFU / O29853: D-lactate dehydrogenase; EC 1.1.99.6 from Archaeoglobus fulgidus
O29853: D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Archaeoglobus fulgidus

31% id,
93% cov

G4RPF4: D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Thermoproteus tenax

31% id,
92% cov

SMc00832: D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) from Sinorhizobium meliloti

29% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory