Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 28 curated entries in PaperBLAST's database that match '1.13.11.27' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_02616: 4-hydroxyphenylpyruvate dioxygenase
is similar to:
PaperBLAST

Psest_3514: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas stutzeri

57% id,
98% cov

Q09PG8: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from uncultured soil

53% id,
96% cov

Pf6N2E2_456: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens

49% id,
99% cov

More...

CCNA_02494: 3-oxoadipate enol-lactonase/4-carboxymuconolactone decarboxylase
is similar to:
PaperBLAST

Q8EKK9: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Shewanella oneidensis

30% id,
91% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory