Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 10 curated entries in PaperBLAST's database that match '1.14.13.2' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_02487: 4-hydroxybenzoate 3-monooxygenase
is similar to:
PaperBLAST

PHHY_PSEAE / P20586: p-hydroxybenzoate hydroxylase; PHBH; 4-hydroxybenzoate 3-monooxygenase; EC 1.14.13.2 from Pseudomonas aeruginosa

61% id,
99% cov

PHHY_PSEFL / P00438: p-hydroxybenzoate hydroxylase; PHBH; PHBHase; 4-hydroxybenzoate 3-monooxygenase; EC 1.14.13.2 from Pseudomonas fluorescens
pobA / P00438: p-hydroxybenzoate hydroxylase (EC 1.14.13.2) from Pseudomonas fluorescens

61% id,
99% cov

RR42_RS21940: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Cupriavidus basilensis

59% id,
100% cov

More...

CCNA_00995: cytochrome P450 CypX
is similar to:
PaperBLAST

bmp12 / A0A1S6M1N0: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Hormoscilla spongeliae

26% id,
49% cov

CCNA_00106: 2-polyprenyl-6-methoxyphenol hydroxylase
is similar to:
PaperBLAST

Q6SSJ6: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2); 3-hydroxybenzoate 4-monooxygenase (EC 1.14.13.23) from Comamonas testosteroni

30% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory