Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 20 curated entries in PaperBLAST's database that match '1.2.1.16' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_03242: succinic semialdehyde dehydrogenase
is similar to:
PaperBLAST

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

61% id,
99% cov

SO1275: succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] from Shewanella oneidensis

60% id,
99% cov

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

60% id,
98% cov

More...

CCNA_03243: NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase
is similar to:
PaperBLAST

A0A0F4THK8: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Pseudomonas fluorescens

38% id,
97% cov

AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

38% id,
97% cov

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

37% id,
96% cov

More...

CCNA_00424: aldehyde dehydrogenase
is similar to:
PaperBLAST

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

38% id,
96% cov

P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis

37% id,
99% cov

Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator

37% id,
97% cov

More...

CCNA_02480: NAD-dependent benzaldehyde dehydrogenase II
is similar to:
PaperBLAST

Q8ZPI3: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Salmonella enterica

37% id,
97% cov

SAD_ECOLI / P76149: Succinate semialdehyde dehydrogenase [NAD(P)+] Sad; SSADH; SSDH; EC 1.2.1.16 from Escherichia coli

36% id,
99% cov

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

37% id,
96% cov

More...

CCNA_00865: alpha-ketoglutaric semialdehyde dehydrogenase xylA
is similar to:
PaperBLAST

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

37% id,
96% cov

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

35% id,
98% cov

AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

35% id,
98% cov

More...

CCNA_02485: vanillin dehydrogenase
is similar to:
PaperBLAST

Q82TA7: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (EC 1.2.1.90) from Nitrosomonas europaea

37% id,
95% cov

Q8ZPI3: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Salmonella enterica

35% id,
98% cov

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

37% id,
94% cov

More...

CCNA_03695: aldehyde dehydrogenase
is similar to:
PaperBLAST

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans

35% id,
98% cov

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

35% id,
98% cov

A0A0F4THK8: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Pseudomonas fluorescens

34% id,
98% cov

More...

CCNA_01679: succinylglutamic semialdehyde dehydrogenase
is similar to:
PaperBLAST

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

34% id,
95% cov

gabD / Q4KKA2: NAD(P)-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

33% id,
95% cov

AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

33% id,
95% cov

More...

CCNA_00618: succinylglutamic semialdehyde dehydrogenase
is similar to:
PaperBLAST

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans

31% id,
99% cov

SAD_ECOLI / P76149: Succinate semialdehyde dehydrogenase [NAD(P)+] Sad; SSADH; SSDH; EC 1.2.1.16 from Escherichia coli

31% id,
96% cov

Q8ZPI3: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Salmonella enterica

31% id,
96% cov

More...

CCNA_01360: malonate-semialdehyde dehydrogenase IolA
is similar to:
PaperBLAST

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans

31% id,
98% cov

AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

31% id,
95% cov

GB|AAC75708.1: succinate-semialdehyde dehydrogenase [NAD(P)+]; EC 1.2.1.16 from Escherichia coli

31% id,
95% cov

More...

CCNA_01274: piperideine-6-carboxylate dehydrogenase
is similar to:
PaperBLAST

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans

30% id,
98% cov

P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis

30% id,
98% cov

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

31% id,
93% cov

More...

CCNA_00846: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase
is similar to:
PaperBLAST

gabD1 / Q0K2K1: NAD(P)+-dependent succinate semialdehyde dehydrogenase monomer (EC 1.2.1.16) from Cupriavidus necator
Q0K2K1: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Cupriavidus necator

31% id,
95% cov

Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator

31% id,
95% cov

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans

29% id,
98% cov

More...

CCNA_02357: methylmalonic acid semialdehyde dehydrogenase
is similar to:
PaperBLAST

P94428: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Bacillus subtilis

29% id,
98% cov

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans

29% id,
98% cov

AO353_11505: succinate-semialdehyde dehydrogenase (EC 1.2.1.16) from Pseudomonas fluorescens

29% id,
96% cov

More...

CCNA_01925: coniferyl aldehyde dehydrogenase
is similar to:
PaperBLAST

Q82TA7: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (EC 1.2.1.90) from Nitrosomonas europaea

27% id,
96% cov

SSDH_PAENI / Q8GAI8: Succinate-semialdehyde dehydrogenase; SsaDH; EC 1.2.1.16 from Paenarthrobacter nicotinovorans

27% id,
90% cov

B1WSJ7: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Crocosphaera subtropica

25% id,
90% cov

More...

CCNA_02881: oxoglutarate semialdehyde dehydrogenase
is similar to:
PaperBLAST

A0A0F4THK8: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) from Pseudomonas fluorescens

28% id,
88% cov

SO1275: succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] from Shewanella oneidensis

27% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 15 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory