Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 108 curated entries in PaperBLAST's database that match '1.4.1.2'.

These curated entries have 87 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_00086: NAD-specific glutamate dehydrogenase GdhZ
is similar to:
PaperBLAST

A0A0H3C571: glutamate dehydrogenase (EC 1.4.1.2) from Caulobacter vibrioides

100% id,
100% cov

AZOBR_RS00190: L-glutamate dehydrogenase (NAD+) (EC 1.4.1.2) from Azospirillum brasilense

45% id,
98% cov

Q8CJY0: glutamate dehydrogenase (EC 1.4.1.2) from Streptomyces coelicolor

43% id,
93% cov

More...

CCNA_00346: dihydrolipoamide dehydrogenase
is similar to:
PaperBLAST

Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana

57% id,
90% cov

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

56% id,
91% cov

P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens

55% id,
90% cov

More...

CCNA_03463: glycine cleavage system protein P, N-terminal domain
is similar to:
PaperBLAST

B0F465: glycine cleavage system (subunit 4/5) (EC 1.4.1.27) from Paratrimastix pyriformis

54% id,
96% cov

Q91W43: glycine cleavage system (EC 1.4.1.27) from Mus musculus

35% id,
42% cov

P23378: glycine cleavage system (subunit 4/4) (EC 1.4.1.27); glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Homo sapiens

34% id,
42% cov

More...

CCNA_03464: glycine cleavage system H protein
is similar to:
PaperBLAST

P0A6T9: glycine cleavage system (subunit 2/3) (EC 1.4.1.27) from Escherichia coli

53% id,
92% cov

GCSH / A8HYD5: glycine cleavage system H protein (EC 1.4.1.27) from Chlamydomonas reinhardtii

58% id,
71% cov

gcvH / P73560: glycine cleavage system H-protein (EC 1.4.1.27) from Synechocystis sp.

43% id,
92% cov

More...

CCNA_03465: glycine cleavage system aminomethyltransferase T
is similar to:
PaperBLAST

P28337: glycine cleavage system (subunit 1/3) (EC 1.4.1.27) from Gallus gallus

45% id,
95% cov

P48728: glycine cleavage system (subunit 2/4) (EC 1.4.1.27) from Homo sapiens

45% id,
92% cov

P49364: glycine cleavage system (subunit 1/4) (EC 1.4.1.27) from Pisum sativum

44% id,
92% cov

More...

CCNA_02164: glutamate dehydrogenase/leucine dehydrogenase
is similar to:
PaperBLAST

VDH_STRCO / Q06539: Valine dehydrogenase; ValDH; EC 1.4.1.23 from Streptomyces coelicolor
vdh / Q06539: valine dehydrogenase monomer (EC 1.4.1.23) from Streptomyces coelicolor

44% id,
96% cov

VDH_STRA4 / O69056: Valine dehydrogenase; ValDH; EC 1.4.1.23 from Streptomyces albus

43% id,
96% cov

DHPH_CALTT / F5L9G2: Phenylalanine dehydrogenase; PheDH; EC 1.4.1.20 from Caldalkalibacillus thermarum

44% id,
93% cov

More...

CCNA_01805: dihydrolipoamide dehydrogenase
is similar to:
PaperBLAST

P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

39% id,
96% cov

Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana

41% id,
92% cov

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

40% id,
93% cov

More...

CCNA_02387: glutathione reductase
is similar to:
PaperBLAST

P72740: glycine cleavage system (subunit 2/2) (EC 1.4.1.27) from Synechocystis sp.

29% id,
98% cov

O08749: glycine cleavage system (subunit 1/2) (EC 1.4.1.27) from Mus musculus

28% id,
91% cov

P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens

27% id,
91% cov

More...

CCNA_03462: glycine cleavage system protein P, C-terminal domain
is similar to:
PaperBLAST

P33195: glycine cleavage system (subunit 1/3) (EC 1.4.1.27) from Escherichia coli

40% id,
51% cov

P26969: glycine cleavage system (subunit 3/4) (EC 1.4.1.27) from Pisum sativum

38% id,
48% cov

Q94B78: glycine cleavage system (subunit 4/5) (EC 1.4.1.27) from Arabidopsis thaliana

39% id,
43% cov

More...

CCNA_03721: glutamate synthase (NADPH) small chain GltD
is similar to:
PaperBLAST

P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

22% id,
69% cov

CCNA_03640: phenylpropionate dioxygenase ferredoxin reductase subunit
is similar to:
PaperBLAST

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

26% id,
48% cov

CCNA_03013: alkyl hydroperoxide reductase subunit F
is similar to:
PaperBLAST

P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens

27% id,
29% cov

O08749: glycine cleavage system (subunit 1/2) (EC 1.4.1.27) from Mus musculus

27% id,
29% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory