Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 7 curated entries in PaperBLAST's database that match '1.5.3.7' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_03229: FAD dependent oxidoreductase
is similar to:
PaperBLAST

amaA / Q88CC4: pipecolate oxidase (EC 1.5.3.7) from Pseudomonas putida

30% id,
93% cov

CCNA_01145: monoamine oxidase
is similar to:
PaperBLAST

FAP1_SCHPO / O43029: L-pipecolate oxidase; L-pipecolic acid oxidase; EC 1.5.3.7 from Schizosaccharomyces pombe

53% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory