Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 48 curated entries in PaperBLAST's database that match '2.1.3.3'.

These curated entries have 32 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_02325: ornithine carbamoyltransferase
is similar to:
PaperBLAST

Q98BB6: ornithine carbamoyltransferase (EC 2.1.3.3) from Mesorhizobium loti

55% id,
99% cov

OTC1A_PSESH / Q02047: Ornithine carbamoyltransferase 1, anabolic; OTCase 1; Ornithine carbamoyltransferase 1, phaseolotoxin-sensitive; SOCT; EC 2.1.3.3 from Pseudomonas savastanoi

54% id,
85% cov

OTCA_PSEAE / P11724: Ornithine carbamoyltransferase, anabolic; OTCase; EC 2.1.3.3 from Pseudomonas aeruginosa

54% id,
84% cov

More...

CCNA_02525: aspartate carbamoyltransferase
is similar to:
PaperBLAST

OTC_MYCBO / P0A5M9: Ornithine carbamoyltransferase; OTCase; EC 2.1.3.3 from Mycobacterium bovis
OTC_MYCTU / P9WIT9: Ornithine carbamoyltransferase; OTCase; EC 2.1.3.3 from Mycobacterium tuberculosis
P0A5M9: ornithine carbamoyltransferase (EC 2.1.3.3) from Mycobacterium tuberculosis
P9WIT9: ornithine carbamoyltransferase (EC 2.1.3.3) from Mycobacterium tuberculosis

30% id,
99% cov

OTCA_PYRFU / Q51742: Ornithine carbamoyltransferase, anabolic; OTCase; EC 2.1.3.3 from Pyrococcus furiosus
Q51742: ornithine carbamoyltransferase (EC 2.1.3.3) from Pyrococcus furiosus

29% id,
99% cov

OTC_MYCS2 / A0QYS8: Ornithine carbamoyltransferase; OTCase; EC 2.1.3.3 from Mycolicibacterium smegmatis

29% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory