Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 38 curated entries in PaperBLAST's database that match '2.3.1.46' as complete word(s).

These curated entries have 34 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_00559: homoserine O-acetyltransferase
is similar to:
PaperBLAST

METXS_HALNC / D0L1T6: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Halothiobacillus neapolitanus

53% id,
92% cov

METXS_PSEPK / Q88CT3: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Pseudomonas putida

52% id,
93% cov

METXS_HALAF / S2L5R8: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Halomonas anticariensis

52% id,
92% cov

More...

CCNA_03309: homoserine O-acetyltransferase
is similar to:
PaperBLAST

METXS_BREDA / F4QV02: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Brevundimonas diminuta

25% id,
87% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

574595-575770 (frame -3) on NC_011916
is similar to:
PaperBLAST

METXS_HALNC / D0L1T6: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Halothiobacillus neapolitanus
Also see hits to annotated proteins above

51% id,
96% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory